RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
CCM2-207ENST00000475551 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
CCM2-207ENST00000475551 BCL11AQ9H165 835 aa25.4■■□□□ 1.66
CCM2-207ENST00000475551 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
CCM2-207ENST00000475551 KANK4Q5T7N3 995 aaPredicted RBP25.39■■□□□ 1.66
CCM2-207ENST00000475551 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
CCM2-207ENST00000475551 PRXQ9BXM0 1461 aa25.36■■□□□ 1.65
CCM2-207ENST00000475551 KCNH8Q96L42 1107 aa25.34■■□□□ 1.65
CCM2-207ENST00000475551 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
CCM2-207ENST00000475551 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
CCM2-207ENST00000475551 FKBP8Q14318 412 aa25.28■■□□□ 1.64
CCM2-207ENST00000475551 BCANQ96GW7 911 aa25.25■■□□□ 1.63
CCM2-207ENST00000475551 MAPKBP1O60336 1514 aa25.24■■□□□ 1.63
CCM2-207ENST00000475551 RBM19Q9Y4C8 960 aaKnown RBP25.2■■□□□ 1.62
CCM2-207ENST00000475551 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
CCM2-207ENST00000475551 RAB3GAP2Q9H2M9 1393 aa25.18■■□□□ 1.62
CCM2-207ENST00000475551 IFT140Q96RY7 1462 aa25.16■■□□□ 1.62
CCM2-207ENST00000475551 NEFLP07196 543 aa25.15■■□□□ 1.62
CCM2-207ENST00000475551 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
CCM2-207ENST00000475551 WDR97A6NE52 1622 aa25.13■■□□□ 1.61
CCM2-207ENST00000475551 DDX10Q13206 875 aaKnown RBP25.11■■□□□ 1.61
CCM2-207ENST00000475551 PPP1R15AO75807 674 aaPredicted RBP25.11■■□□□ 1.61
CCM2-207ENST00000475551 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
CCM2-207ENST00000475551 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
CCM2-207ENST00000475551 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CCM2-207ENST00000475551 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
CCM2-207ENST00000475551 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
CCM2-207ENST00000475551 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
CCM2-207ENST00000475551 ITGAEP38570 1179 aa25.06■■□□□ 1.6
CCM2-207ENST00000475551 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
CCM2-207ENST00000475551 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
CCM2-207ENST00000475551 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.67e-7■■■■■ 33.7
CCM2-207ENST00000475551 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
CCM2-207ENST00000475551 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
CCM2-207ENST00000475551 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
CCM2-207ENST00000475551 TIAM1Q13009 1591 aa24.96■■□□□ 1.59
CCM2-207ENST00000475551 ANP32CO43423 234 aa24.96■■□□□ 1.59
CCM2-207ENST00000475551 SIN3AQ96ST3 1273 aa24.94■■□□□ 1.58
CCM2-207ENST00000475551 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
CCM2-207ENST00000475551 MSH5O43196 834 aa24.91■■□□□ 1.58
CCM2-207ENST00000475551 IGF1RP08069 1367 aa24.91■■□□□ 1.58
CCM2-207ENST00000475551 FANCIQ9NVI1 1328 aa24.9■■□□□ 1.58
CCM2-207ENST00000475551 PBRM1Q86U86 1689 aa24.89■■□□□ 1.57
CCM2-207ENST00000475551 LRRC9Q6ZRR7 1453 aa24.87■■□□□ 1.57
CCM2-207ENST00000475551 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
CCM2-207ENST00000475551 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
CCM2-207ENST00000475551 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
CCM2-207ENST00000475551 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
CCM2-207ENST00000475551 HIRIP3Q9BW71 556 aaPredicted RBP24.76■■□□□ 1.55
CCM2-207ENST00000475551 CDK11AQ9UQ88 783 aaPredicted RBP24.75■■□□□ 1.55
CCM2-207ENST00000475551 CUL7Q14999 1698 aa24.74■■□□□ 1.55
CCM2-207ENST00000475551 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
CCM2-207ENST00000475551 CFAP43Q8NDM7 1665 aa24.72■■□□□ 1.55
CCM2-207ENST00000475551 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
CCM2-207ENST00000475551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.72■■□□□ 1.55
CCM2-207ENST00000475551 ERICH6BQ5W0A0 696 aa24.7■■□□□ 1.54
CCM2-207ENST00000475551 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
CCM2-207ENST00000475551 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.54
CCM2-207ENST00000475551 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
CCM2-207ENST00000475551 MYT1LQ9UL68 1186 aa24.68■■□□□ 1.54
CCM2-207ENST00000475551 FBLN2P98095 1184 aa24.65■■□□□ 1.54
CCM2-207ENST00000475551 TONSLQ96HA7 1378 aa24.65■■□□□ 1.54
CCM2-207ENST00000475551 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
CCM2-207ENST00000475551 HNRNPUQ00839 825 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCM2-207ENST00000475551 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
CCM2-207ENST00000475551 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
CCM2-207ENST00000475551 GRIN2AQ12879 1464 aa24.57■■□□□ 1.52
CCM2-207ENST00000475551 PPP4R2Q9NY27 417 aa24.56■■□□□ 1.52
CCM2-207ENST00000475551 CHD1O14646 1710 aa24.54■■□□□ 1.52
CCM2-207ENST00000475551 IRX6P78412 446 aaPredicted RBP24.53■■□□□ 1.52
CCM2-207ENST00000475551 UACAQ9BZF9 1416 aa24.53■■□□□ 1.52
CCM2-207ENST00000475551 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
CCM2-207ENST00000475551 FYCO1Q9BQS8 1478 aa24.5■■□□□ 1.51
CCM2-207ENST00000475551 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
CCM2-207ENST00000475551 KDM5BQ9UGL1 1544 aa24.47■■□□□ 1.51
CCM2-207ENST00000475551 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
CCM2-207ENST00000475551 CASKIN1Q8WXD9 1431 aa24.45■■□□□ 1.5
CCM2-207ENST00000475551 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
CCM2-207ENST00000475551 PTPN23Q9H3S7 1636 aa24.43■■□□□ 1.5
CCM2-207ENST00000475551 CTTNBP2Q8WZ74 1663 aa24.41■■□□□ 1.5
CCM2-207ENST00000475551 WASHC2AQ641Q2 1341 aa24.4■■□□□ 1.5
CCM2-207ENST00000475551 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
CCM2-207ENST00000475551 NUP160Q12769 1436 aa24.4■■□□□ 1.5
CCM2-207ENST00000475551 DEKP35659 375 aaKnown RBP24.4■■□□□ 1.5
CCM2-207ENST00000475551 NCOA2Q15596 1464 aa24.39■■□□□ 1.5
CCM2-207ENST00000475551 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
CCM2-207ENST00000475551 FHOD3Q2V2M9 1422 aa24.38■■□□□ 1.49
CCM2-207ENST00000475551 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
CCM2-207ENST00000475551 PTPRKQ15262 1439 aa24.37■■□□□ 1.49
CCM2-207ENST00000475551 NAIPQ13075 1403 aa24.35■■□□□ 1.49
CCM2-207ENST00000475551 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
CCM2-207ENST00000475551 HSPA5P11021 654 aaKnown RBP24.34■■□□□ 1.49
CCM2-207ENST00000475551 KIAA0586Q9BVV6 1533 aa24.33■■□□□ 1.49
CCM2-207ENST00000475551 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
CCM2-207ENST00000475551 IQGAP2Q13576 1575 aa24.32■■□□□ 1.48
CCM2-207ENST00000475551 NOP58Q9Y2X3 529 aaKnown RBP24.3■■□□□ 1.48
CCM2-207ENST00000475551 B4GALNT3Q6L9W6 998 aa24.29■■□□□ 1.48
CCM2-207ENST00000475551 FMN1Q68DA7 1419 aa24.29■■□□□ 1.48
CCM2-207ENST00000475551 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.48
CCM2-207ENST00000475551 CCDC184Q52MB2 194 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms