RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
TMEM39A-206ENST00000473684 GSE1Q14687 1217 aa8.66□□□□□ -1.02
TMEM39A-206ENST00000473684 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
TMEM39A-206ENST00000473684 BCANQ96GW7 911 aa8.65□□□□□ -1.02
TMEM39A-206ENST00000473684 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-206ENST00000473684 CREBZFQ9NS37 354 aa8.63□□□□□ -1.03
TMEM39A-206ENST00000473684 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
TMEM39A-206ENST00000473684 MNX1P50219 401 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-206ENST00000473684 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
TMEM39A-206ENST00000473684 PRR29P0C7W0 189 aa8.61□□□□□ -1.03
TMEM39A-206ENST00000473684 REM2Q8IYK8 340 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-206ENST00000473684 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
TMEM39A-206ENST00000473684 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
TMEM39A-206ENST00000473684 DNAJC5Q9H3Z4 198 aa8.59□□□□□ -1.04
TMEM39A-206ENST00000473684 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
TMEM39A-206ENST00000473684 FAM212AQ96EL1 285 aa8.56□□□□□ -1.04
TMEM39A-206ENST00000473684 HRCP23327 699 aa8.54□□□□□ -1.04
TMEM39A-206ENST00000473684 TAOK2Q9UL54 1235 aa8.53□□□□□ -1.04
TMEM39A-206ENST00000473684 CHRM1P11229 460 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-206ENST00000473684 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
TMEM39A-206ENST00000473684 NACADO15069 1562 aa8.52□□□□□ -1.05
TMEM39A-206ENST00000473684 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-206ENST00000473684 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
TMEM39A-206ENST00000473684 RB1CC1Q8TDY2 1594 aa8.5□□□□□ -1.05
TMEM39A-206ENST00000473684 VGFO15240 615 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-206ENST00000473684 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-206ENST00000473684 UNC13AQ9UPW8 1703 aa8.47□□□□□ -1.05
TMEM39A-206ENST00000473684 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.05
TMEM39A-206ENST00000473684 STK25O00506 426 aa8.46□□□□□ -1.06
TMEM39A-206ENST00000473684 GTPBP6O43824 516 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-206ENST00000473684 PYGBP11216 843 aa8.43□□□□□ -1.06
TMEM39A-206ENST00000473684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-206ENST00000473684 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-206ENST00000473684 DCAF1Q9Y4B6 1507 aa8.41□□□□□ -1.06
TMEM39A-206ENST00000473684 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-206ENST00000473684 STK24Q9Y6E0 443 aa8.4□□□□□ -1.07
TMEM39A-206ENST00000473684 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
TMEM39A-206ENST00000473684 CHADLQ6NUI6 762 aa8.38□□□□□ -1.07
TMEM39A-206ENST00000473684 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-206ENST00000473684 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-206ENST00000473684 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-206ENST00000473684 NBR1Q14596 966 aa8.33□□□□□ -1.08
TMEM39A-206ENST00000473684 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-206ENST00000473684 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
TMEM39A-206ENST00000473684 PRKAR2AP13861 404 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-206ENST00000473684 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-206ENST00000473684 ABCC9O60706 1549 aa8.27□□□□□ -1.08
TMEM39A-206ENST00000473684 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.08
TMEM39A-206ENST00000473684 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
TMEM39A-206ENST00000473684 PCDHB13Q9Y5F0 798 aa8.27□□□□□ -1.09
TMEM39A-206ENST00000473684 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-206ENST00000473684 BICRAQ9NZM4 1560 aa8.23□□□□□ -1.09
TMEM39A-206ENST00000473684 PSEN1P49768 467 aa8.23□□□□□ -1.09
TMEM39A-206ENST00000473684 CADPS2Q86UW7 1296 aa8.21□□□□□ -1.1
TMEM39A-206ENST00000473684 MFRPQ9BY79 579 aa8.21□□□□□ -1.1
TMEM39A-206ENST00000473684 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
TMEM39A-206ENST00000473684 PAK3O75914 559 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-206ENST00000473684 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
TMEM39A-206ENST00000473684 P3H3Q8IVL6 736 aa8.18□□□□□ -1.1
TMEM39A-206ENST00000473684 KIF12Q96FN5 646 aa8.17□□□□□ -1.1
TMEM39A-206ENST00000473684 MAP3K13O43283 966 aa8.17□□□□□ -1.1
TMEM39A-206ENST00000473684 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
TMEM39A-206ENST00000473684 CHRDL2Q6WN34 429 aa8.16□□□□□ -1.1
TMEM39A-206ENST00000473684 WDR70Q9NW82 654 aa8.14□□□□□ -1.11
TMEM39A-206ENST00000473684 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
TMEM39A-206ENST00000473684 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
TMEM39A-206ENST00000473684 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
TMEM39A-206ENST00000473684 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
TMEM39A-206ENST00000473684 SOX12O15370 315 aa8.12□□□□□ -1.11
TMEM39A-206ENST00000473684 PPP1R37O75864 691 aa8.12□□□□□ -1.11
TMEM39A-206ENST00000473684 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
TMEM39A-206ENST00000473684 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
TMEM39A-206ENST00000473684 NLRP6P59044 892 aa8.11□□□□□ -1.11
TMEM39A-206ENST00000473684 PHF8Q9UPP1 1060 aa8.1□□□□□ -1.11
TMEM39A-206ENST00000473684 ZRANB1Q9UGI0 708 aa8.09□□□□□ -1.11
TMEM39A-206ENST00000473684 CD44P16070 742 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-206ENST00000473684 PHF12Q96QT6 1004 aa8.06□□□□□ -1.12
TMEM39A-206ENST00000473684 CENPBP07199 599 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-206ENST00000473684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.04□□□□□ -1.12
TMEM39A-206ENST00000473684 ARHGEF1Q92888 912 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-206ENST00000473684 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
TMEM39A-206ENST00000473684 E2F4Q16254 413 aa8.02□□□□□ -1.13
TMEM39A-206ENST00000473684 NCKAP5LQ9HCH0 1330 aa8.01□□□□□ -1.13
TMEM39A-206ENST00000473684 LMOD2Q6P5Q4 547 aa8.01□□□□□ -1.13
TMEM39A-206ENST00000473684 TMEM106CQ9BVX2 250 aa8□□□□□ -1.13
TMEM39A-206ENST00000473684 FAM9AQ8IZU1 332 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-206ENST00000473684 PCGF6Q9BYE7 350 aa7.99□□□□□ -1.13
TMEM39A-206ENST00000473684 TRPC6Q9Y210 931 aa7.99□□□□□ -1.13
TMEM39A-206ENST00000473684 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-206ENST00000473684 ZCCHC6Q5VYS8 1495 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-206ENST00000473684 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
TMEM39A-206ENST00000473684 GOLGA2Q08379 1002 aa7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 MFSD10Q14728 455 aa7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 PDE4AP27815 886 aa7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 C19orf67A6NJJ6 358 aa7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-206ENST00000473684 ZEB1P37275 1124 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-206ENST00000473684 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-206ENST00000473684 TESPA1A2RU30 521 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms