RNA–Protein interactions for RNA: ENST00000473552.1

DKC1-207, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-207ENST00000473552 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
DKC1-207ENST00000473552 SSUH2Q9Y2M2 353 aa16.66■□□□□ 0.26
DKC1-207ENST00000473552 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
DKC1-207ENST00000473552 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
DKC1-207ENST00000473552 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
DKC1-207ENST00000473552 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
DKC1-207ENST00000473552 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
DKC1-207ENST00000473552 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
DKC1-207ENST00000473552 CUX1P39880 1505 aa16.63■□□□□ 0.25
DKC1-207ENST00000473552 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
DKC1-207ENST00000473552 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
DKC1-207ENST00000473552 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
DKC1-207ENST00000473552 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
DKC1-207ENST00000473552 WDR62O43379 1518 aa16.58■□□□□ 0.24
DKC1-207ENST00000473552 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
DKC1-207ENST00000473552 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
DKC1-207ENST00000473552 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
DKC1-207ENST00000473552 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
DKC1-207ENST00000473552 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
DKC1-207ENST00000473552 SPDYE1Q8NFV5 336 aaPredicted RBP16.43■□□□□ 0.22
DKC1-207ENST00000473552 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
DKC1-207ENST00000473552 FKBP8Q14318 412 aa16.41■□□□□ 0.22
DKC1-207ENST00000473552 SOGA1O94964 1423 aa16.39■□□□□ 0.21
DKC1-207ENST00000473552 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
DKC1-207ENST00000473552 IFT140Q96RY7 1462 aa16.38■□□□□ 0.21
DKC1-207ENST00000473552 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
DKC1-207ENST00000473552 CUX2O14529 1486 aa16.37■□□□□ 0.21
DKC1-207ENST00000473552 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
DKC1-207ENST00000473552 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
DKC1-207ENST00000473552 EEA1Q15075 1411 aa16.31■□□□□ 0.2
DKC1-207ENST00000473552 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
DKC1-207ENST00000473552 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
DKC1-207ENST00000473552 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
DKC1-207ENST00000473552 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
DKC1-207ENST00000473552 PROM2Q8N271 834 aa16.25■□□□□ 0.19
DKC1-207ENST00000473552 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
DKC1-207ENST00000473552 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
DKC1-207ENST00000473552 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
DKC1-207ENST00000473552 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
DKC1-207ENST00000473552 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
DKC1-207ENST00000473552 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
DKC1-207ENST00000473552 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
DKC1-207ENST00000473552 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
DKC1-207ENST00000473552 CUL7Q14999 1698 aa16.19■□□□□ 0.18
DKC1-207ENST00000473552 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.183e-13■■■■□ 25.1
DKC1-207ENST00000473552 POTEHQ6S545 545 aa16.19■□□□□ 0.18
DKC1-207ENST00000473552 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
DKC1-207ENST00000473552 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
DKC1-207ENST00000473552 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
DKC1-207ENST00000473552 KIF21BO75037 1637 aa16.14■□□□□ 0.17
DKC1-207ENST00000473552 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
DKC1-207ENST00000473552 IGF1RP08069 1367 aa16.12■□□□□ 0.17
DKC1-207ENST00000473552 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
DKC1-207ENST00000473552 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
DKC1-207ENST00000473552 PRXQ9BXM0 1461 aa16.09■□□□□ 0.17
DKC1-207ENST00000473552 GOLGA3Q08378 1498 aa16.06■□□□□ 0.16
DKC1-207ENST00000473552 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
DKC1-207ENST00000473552 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
DKC1-207ENST00000473552 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
DKC1-207ENST00000473552 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
DKC1-207ENST00000473552 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
DKC1-207ENST00000473552 CHD1O14646 1710 aa16■□□□□ 0.15
DKC1-207ENST00000473552 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
DKC1-207ENST00000473552 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
DKC1-207ENST00000473552 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
DKC1-207ENST00000473552 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
DKC1-207ENST00000473552 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
DKC1-207ENST00000473552 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
DKC1-207ENST00000473552 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
DKC1-207ENST00000473552 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
DKC1-207ENST00000473552 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
DKC1-207ENST00000473552 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
DKC1-207ENST00000473552 NUP160Q12769 1436 aa15.86■□□□□ 0.13
DKC1-207ENST00000473552 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
DKC1-207ENST00000473552 MIER1Q8N108 512 aa15.82■□□□□ 0.12
DKC1-207ENST00000473552 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
DKC1-207ENST00000473552 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
DKC1-207ENST00000473552 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
DKC1-207ENST00000473552 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
DKC1-207ENST00000473552 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
DKC1-207ENST00000473552 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
DKC1-207ENST00000473552 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.11
DKC1-207ENST00000473552 HAX1O00165 279 aa15.76■□□□□ 0.11
DKC1-207ENST00000473552 CLIP1P30622 1438 aa15.76■□□□□ 0.11
DKC1-207ENST00000473552 UGGT2Q9NYU1 1516 aa15.75■□□□□ 0.11
DKC1-207ENST00000473552 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
DKC1-207ENST00000473552 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
DKC1-207ENST00000473552 RANGAP1P46060 587 aaPredicted RBP15.72■□□□□ 0.11
DKC1-207ENST00000473552 KIAA0556O60303 1618 aa15.7■□□□□ 0.1
DKC1-207ENST00000473552 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
DKC1-207ENST00000473552 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
DKC1-207ENST00000473552 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
DKC1-207ENST00000473552 CARMIL2Q6F5E8 1435 aa15.67■□□□□ 0.1
DKC1-207ENST00000473552 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
DKC1-207ENST00000473552 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
DKC1-207ENST00000473552 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
DKC1-207ENST00000473552 ARAP1Q96P48 1450 aa15.64■□□□□ 0.09
DKC1-207ENST00000473552 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
DKC1-207ENST00000473552 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
DKC1-207ENST00000473552 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms