RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, humanhuman

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-208ENST00000472411 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
TMEM9-208ENST00000472411 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
TMEM9-208ENST00000472411 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
TMEM9-208ENST00000472411 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
TMEM9-208ENST00000472411 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
TMEM9-208ENST00000472411 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
TMEM9-208ENST00000472411 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
TMEM9-208ENST00000472411 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
TMEM9-208ENST00000472411 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
TMEM9-208ENST00000472411 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
TMEM9-208ENST00000472411 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
TMEM9-208ENST00000472411 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
TMEM9-208ENST00000472411 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
TMEM9-208ENST00000472411 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
TMEM9-208ENST00000472411 PPP1R15AO75807 674 aaPredicted RBP15.14■□□□□ 0.01
TMEM9-208ENST00000472411 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
TMEM9-208ENST00000472411 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
TMEM9-208ENST00000472411 BCANQ96GW7 911 aa15.09■□□□□ 0.01
TMEM9-208ENST00000472411 FKBP8Q14318 412 aa15.08■□□□□ 0
TMEM9-208ENST00000472411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 0
TMEM9-208ENST00000472411 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
TMEM9-208ENST00000472411 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
TMEM9-208ENST00000472411 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
TMEM9-208ENST00000472411 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
TMEM9-208ENST00000472411 CCER2I3L3R5 266 aa15.04■□□□□ -0
TMEM9-208ENST00000472411 EFCAB5A4FU69 1503 aa15.03■□□□□ -0
TMEM9-208ENST00000472411 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -01e-6■■□□□ 11.4
TMEM9-208ENST00000472411 ANP32CO43423 234 aa15.03■□□□□ -0
TMEM9-208ENST00000472411 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
TMEM9-208ENST00000472411 TRIM52Q96A61 297 aa15.02■□□□□ -0
TMEM9-208ENST00000472411 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
TMEM9-208ENST00000472411 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
TMEM9-208ENST00000472411 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
TMEM9-208ENST00000472411 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
TMEM9-208ENST00000472411 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
TMEM9-208ENST00000472411 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
TMEM9-208ENST00000472411 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
TMEM9-208ENST00000472411 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
TMEM9-208ENST00000472411 CCDC18Q5T9S5 1454 aa14.98□□□□□ -0.01
TMEM9-208ENST00000472411 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
TMEM9-208ENST00000472411 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
TMEM9-208ENST00000472411 CUL7Q14999 1698 aa14.96□□□□□ -0.01
TMEM9-208ENST00000472411 NEFLP07196 543 aa14.96□□□□□ -0.01
TMEM9-208ENST00000472411 ANP32EQ9BTT0 268 aa14.96□□□□□ -0.01
TMEM9-208ENST00000472411 HFM1A2PYH4 1435 aa14.96□□□□□ -0.02
TMEM9-208ENST00000472411 UACAQ9BZF9 1416 aa14.96□□□□□ -0.02
TMEM9-208ENST00000472411 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
TMEM9-208ENST00000472411 PTPN23Q9H3S7 1636 aa14.93□□□□□ -0.02
TMEM9-208ENST00000472411 NESP48681 1621 aa14.92□□□□□ -0.02
TMEM9-208ENST00000472411 NAIPQ13075 1403 aa14.92□□□□□ -0.02
TMEM9-208ENST00000472411 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
TMEM9-208ENST00000472411 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
TMEM9-208ENST00000472411 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
TMEM9-208ENST00000472411 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
TMEM9-208ENST00000472411 SAMD9Q5K651 1589 aa14.87□□□□□ -0.03
TMEM9-208ENST00000472411 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
TMEM9-208ENST00000472411 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
TMEM9-208ENST00000472411 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
TMEM9-208ENST00000472411 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
TMEM9-208ENST00000472411 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
TMEM9-208ENST00000472411 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
TMEM9-208ENST00000472411 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
TMEM9-208ENST00000472411 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
TMEM9-208ENST00000472411 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
TMEM9-208ENST00000472411 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
TMEM9-208ENST00000472411 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
TMEM9-208ENST00000472411 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
TMEM9-208ENST00000472411 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
TMEM9-208ENST00000472411 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
TMEM9-208ENST00000472411 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
TMEM9-208ENST00000472411 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
TMEM9-208ENST00000472411 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
TMEM9-208ENST00000472411 DENND4BO75064 1496 aaPredicted RBP14.79□□□□□ -0.04
TMEM9-208ENST00000472411 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
TMEM9-208ENST00000472411 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
TMEM9-208ENST00000472411 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
TMEM9-208ENST00000472411 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
TMEM9-208ENST00000472411 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
TMEM9-208ENST00000472411 KDM6BO15054 1643 aa14.74□□□□□ -0.05
TMEM9-208ENST00000472411 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
TMEM9-208ENST00000472411 CCDC184Q52MB2 194 aa14.74□□□□□ -0.05
TMEM9-208ENST00000472411 L3MBTL2Q969R5 705 aa14.74□□□□□ -0.05
TMEM9-208ENST00000472411 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
TMEM9-208ENST00000472411 C11orf95C9JLR9 678 aaPredicted RBP14.72□□□□□ -0.05
TMEM9-208ENST00000472411 FOXD1Q16676 465 aa14.72□□□□□ -0.05
TMEM9-208ENST00000472411 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
TMEM9-208ENST00000472411 AKNAQ7Z591 1439 aa14.7□□□□□ -0.06
TMEM9-208ENST00000472411 CNTLNQ9NXG0 1405 aa14.69□□□□□ -0.06
TMEM9-208ENST00000472411 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
TMEM9-208ENST00000472411 MSH5O43196 834 aa14.69□□□□□ -0.06
TMEM9-208ENST00000472411 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
TMEM9-208ENST00000472411 PRKRIP1Q9H875 184 aaPredicted RBP14.68□□□□□ -0.06
TMEM9-208ENST00000472411 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
TMEM9-208ENST00000472411 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
TMEM9-208ENST00000472411 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
TMEM9-208ENST00000472411 CCDC7Q96M83 1385 aa14.67□□□□□ -0.06
TMEM9-208ENST00000472411 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
TMEM9-208ENST00000472411 NBPF8Q3BBV2 869 aa14.66□□□□□ -0.06
TMEM9-208ENST00000472411 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
TMEM9-208ENST00000472411 FAM9BQ8IZU0 186 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms