RNA–Protein interactions for RNA: ENST00000472148.5

SLC13A3-210, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-210ENST00000472148 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
SLC13A3-210ENST00000472148 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
SLC13A3-210ENST00000472148 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
SLC13A3-210ENST00000472148 BIVM-ERCC5R4GMW8 1640 aa14.56□□□□□ -0.08
SLC13A3-210ENST00000472148 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
SLC13A3-210ENST00000472148 CFTRP13569 1480 aa14.55□□□□□ -0.08
SLC13A3-210ENST00000472148 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
SLC13A3-210ENST00000472148 SETD5Q9C0A6 1442 aa14.53□□□□□ -0.08
SLC13A3-210ENST00000472148 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
SLC13A3-210ENST00000472148 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
SLC13A3-210ENST00000472148 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
SLC13A3-210ENST00000472148 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
SLC13A3-210ENST00000472148 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
SLC13A3-210ENST00000472148 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
SLC13A3-210ENST00000472148 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
SLC13A3-210ENST00000472148 MAPKBP1O60336 1514 aa14.48□□□□□ -0.09
SLC13A3-210ENST00000472148 SENP3-EIF4A1A0A087X0R7 540 aa14.47□□□□□ -0.09
SLC13A3-210ENST00000472148 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
SLC13A3-210ENST00000472148 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
SLC13A3-210ENST00000472148 NESP48681 1621 aa14.45□□□□□ -0.1
SLC13A3-210ENST00000472148 FOXD1Q16676 465 aa14.44□□□□□ -0.1
SLC13A3-210ENST00000472148 ANP32CO43423 234 aa14.44□□□□□ -0.1
SLC13A3-210ENST00000472148 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
SLC13A3-210ENST00000472148 TIAM1Q13009 1591 aa14.42□□□□□ -0.1
SLC13A3-210ENST00000472148 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
SLC13A3-210ENST00000472148 TONSLQ96HA7 1378 aa14.41□□□□□ -0.1
SLC13A3-210ENST00000472148 MTUS2Q5JR59 1369 aa14.41□□□□□ -0.1
SLC13A3-210ENST00000472148 NEFLP07196 543 aa14.39□□□□□ -0.11
SLC13A3-210ENST00000472148 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
SLC13A3-210ENST00000472148 POLR3GLQ9BT43 218 aa14.37□□□□□ -0.11
SLC13A3-210ENST00000472148 PCF11O94913 1555 aaKnown RBP14.37□□□□□ -0.11
SLC13A3-210ENST00000472148 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■■□□ 16.8
SLC13A3-210ENST00000472148 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
SLC13A3-210ENST00000472148 PTPRKQ15262 1439 aa14.33□□□□□ -0.12
SLC13A3-210ENST00000472148 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
SLC13A3-210ENST00000472148 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
SLC13A3-210ENST00000472148 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
SLC13A3-210ENST00000472148 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
SLC13A3-210ENST00000472148 HSPA5P11021 654 aaKnown RBP14.27□□□□□ -0.12
SLC13A3-210ENST00000472148 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
SLC13A3-210ENST00000472148 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.12
SLC13A3-210ENST00000472148 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.13
SLC13A3-210ENST00000472148 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.13
SLC13A3-210ENST00000472148 MYT1Q01538 1121 aa14.25□□□□□ -0.13
SLC13A3-210ENST00000472148 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
SLC13A3-210ENST00000472148 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
SLC13A3-210ENST00000472148 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
SLC13A3-210ENST00000472148 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
SLC13A3-210ENST00000472148 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
SLC13A3-210ENST00000472148 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.14
SLC13A3-210ENST00000472148 L3MBTL2Q969R5 705 aa14.2□□□□□ -0.14
SLC13A3-210ENST00000472148 WASHC2AQ641Q2 1341 aa14.2□□□□□ -0.14
SLC13A3-210ENST00000472148 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
SLC13A3-210ENST00000472148 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
SLC13A3-210ENST00000472148 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
SLC13A3-210ENST00000472148 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
SLC13A3-210ENST00000472148 FBLN2P98095 1184 aa14.18□□□□□ -0.14
SLC13A3-210ENST00000472148 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
SLC13A3-210ENST00000472148 MPHOSPH9Q99550 1183 aa14.17□□□□□ -0.14
SLC13A3-210ENST00000472148 NAIPQ13075 1403 aa14.17□□□□□ -0.14
SLC13A3-210ENST00000472148 MAP3K1Q13233 1512 aa14.16□□□□□ -0.14
SLC13A3-210ENST00000472148 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
SLC13A3-210ENST00000472148 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.142e-8■■■■■ 35.8
SLC13A3-210ENST00000472148 MRS2Q9HD23 443 aa14.15□□□□□ -0.14
SLC13A3-210ENST00000472148 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
SLC13A3-210ENST00000472148 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
SLC13A3-210ENST00000472148 UACAQ9BZF9 1416 aa14.14□□□□□ -0.15
SLC13A3-210ENST00000472148 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
SLC13A3-210ENST00000472148 B4GALNT3Q6L9W6 998 aa14.13□□□□□ -0.15
SLC13A3-210ENST00000472148 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
SLC13A3-210ENST00000472148 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
SLC13A3-210ENST00000472148 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SLC13A3-210ENST00000472148 NBPF8Q3BBV2 869 aa14.12□□□□□ -0.15
SLC13A3-210ENST00000472148 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
SLC13A3-210ENST00000472148 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
SLC13A3-210ENST00000472148 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
SLC13A3-210ENST00000472148 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
SLC13A3-210ENST00000472148 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
SLC13A3-210ENST00000472148 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
SLC13A3-210ENST00000472148 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.16
SLC13A3-210ENST00000472148 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
SLC13A3-210ENST00000472148 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
SLC13A3-210ENST00000472148 MSH5O43196 834 aa14.07□□□□□ -0.16
SLC13A3-210ENST00000472148 EFCAB5A4FU69 1503 aa14.06□□□□□ -0.16
SLC13A3-210ENST00000472148 CDK11AQ9UQ88 783 aaPredicted RBP14.05□□□□□ -0.16
SLC13A3-210ENST00000472148 KDM6BO15054 1643 aa14.05□□□□□ -0.16
SLC13A3-210ENST00000472148 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
SLC13A3-210ENST00000472148 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
SLC13A3-210ENST00000472148 ERICH6Q7L0X2 663 aa14.03□□□□□ -0.16
SLC13A3-210ENST00000472148 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
SLC13A3-210ENST00000472148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.01□□□□□ -0.17
SLC13A3-210ENST00000472148 DENND4BO75064 1496 aaPredicted RBP14□□□□□ -0.17
SLC13A3-210ENST00000472148 KIF7Q2M1P5 1343 aa14□□□□□ -0.17
SLC13A3-210ENST00000472148 CFDP1Q9UEE9 299 aaPredicted RBP13.99□□□□□ -0.17
SLC13A3-210ENST00000472148 LRRIQ1Q96JM4 1722 aa13.99□□□□□ -0.17
SLC13A3-210ENST00000472148 CTTNBP2Q8WZ74 1663 aa13.98□□□□□ -0.17
SLC13A3-210ENST00000472148 CCDC7Q96M83 1385 aa13.98□□□□□ -0.17
SLC13A3-210ENST00000472148 PKD2Q13563 968 aa13.96□□□□□ -0.17
SLC13A3-210ENST00000472148 CUL7Q14999 1698 aa13.96□□□□□ -0.17
SLC13A3-210ENST00000472148 KDM5BQ9UGL1 1544 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms