RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 PEG3Q9GZU2 1588 aa8.94□□□□□ -0.98
LMNB1-205ENST00000472034 CHD1O14646 1710 aa8.94□□□□□ -0.98
LMNB1-205ENST00000472034 RSF1Q96T23 1441 aaPredicted RBP8.92□□□□□ -0.98
LMNB1-205ENST00000472034 FKBP8Q14318 412 aa8.89□□□□□ -0.99
LMNB1-205ENST00000472034 RBM42Q9BTD8 480 aaKnown RBP8.89□□□□□ -0.99
LMNB1-205ENST00000472034 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
LMNB1-205ENST00000472034 SPDYE4A6NLX3 237 aa8.87□□□□□ -0.99
LMNB1-205ENST00000472034 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
LMNB1-205ENST00000472034 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
LMNB1-205ENST00000472034 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
LMNB1-205ENST00000472034 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
LMNB1-205ENST00000472034 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
LMNB1-205ENST00000472034 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
LMNB1-205ENST00000472034 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■■■ 32.9
LMNB1-205ENST00000472034 LMTK3Q96Q04 1460 aa8.81□□□□□ -1
LMNB1-205ENST00000472034 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
LMNB1-205ENST00000472034 CFTRP13569 1480 aa8.8□□□□□ -1
LMNB1-205ENST00000472034 FBXO41Q8TF61 875 aa8.79□□□□□ -1
LMNB1-205ENST00000472034 ILDR2Q71H61 639 aa8.78□□□□□ -1
LMNB1-205ENST00000472034 HECW2Q9P2P5 1572 aa8.78□□□□□ -1
LMNB1-205ENST00000472034 GAPVD1Q14C86 1478 aa8.77□□□□□ -1.01
LMNB1-205ENST00000472034 KIF13AQ9H1H9 1805 aa8.76□□□□□ -1.01
LMNB1-205ENST00000472034 ERCC6L2Q5T890 1561 aa8.76□□□□□ -1.01
LMNB1-205ENST00000472034 SOCS7O14512 581 aa8.74□□□□□ -1.01
LMNB1-205ENST00000472034 AKT1S1Q96B36 256 aa8.74□□□□□ -1.01
LMNB1-205ENST00000472034 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
LMNB1-205ENST00000472034 TOPBP1Q92547 1522 aa8.73□□□□□ -1.01
LMNB1-205ENST00000472034 WIZO95785 1651 aa8.72□□□□□ -1.01
LMNB1-205ENST00000472034 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
LMNB1-205ENST00000472034 SNAPC4Q5SXM2 1469 aa8.69□□□□□ -1.02
LMNB1-205ENST00000472034 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
LMNB1-205ENST00000472034 ADGRL1O94910 1474 aa8.67□□□□□ -1.02
LMNB1-205ENST00000472034 SYNJ2O15056 1496 aa8.66□□□□□ -1.02
LMNB1-205ENST00000472034 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
LMNB1-205ENST00000472034 CHMP7Q8WUX9 453 aaPredicted RBP8.66□□□□□ -1.02
LMNB1-205ENST00000472034 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
LMNB1-205ENST00000472034 KDM6BO15054 1643 aa8.65□□□□□ -1.02
LMNB1-205ENST00000472034 PROM2Q8N271 834 aa8.65□□□□□ -1.02
LMNB1-205ENST00000472034 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
LMNB1-205ENST00000472034 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
LMNB1-205ENST00000472034 RAD54L2Q9Y4B4 1467 aa8.64□□□□□ -1.03
LMNB1-205ENST00000472034 DISP3Q9P2K9 1392 aa8.62□□□□□ -1.03
LMNB1-205ENST00000472034 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
LMNB1-205ENST00000472034 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
LMNB1-205ENST00000472034 REM2Q8IYK8 340 aaPredicted RBP8.61□□□□□ -1.03
LMNB1-205ENST00000472034 POLA1P09884 1462 aaPredicted RBP8.6□□□□□ -1.03
LMNB1-205ENST00000472034 DNMBPQ6XZF7 1577 aa8.6□□□□□ -1.03
LMNB1-205ENST00000472034 ABCC10Q5T3U5 1492 aa8.58□□□□□ -1.04
LMNB1-205ENST00000472034 TSPOAP1O95153 1857 aa8.57□□□□□ -1.04
LMNB1-205ENST00000472034 CLEC11AQ9Y240 323 aa8.57□□□□□ -1.04
LMNB1-205ENST00000472034 MAGI1Q96QZ7 1491 aaPredicted RBP8.57□□□□□ -1.04
LMNB1-205ENST00000472034 DIP2BQ9P265 1576 aa8.56□□□□□ -1.04
LMNB1-205ENST00000472034 ABCC8Q09428 1581 aa8.55□□□□□ -1.04
LMNB1-205ENST00000472034 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
LMNB1-205ENST00000472034 SOGA1O94964 1423 aa8.53□□□□□ -1.04
LMNB1-205ENST00000472034 GRIN2BQ13224 1484 aa8.51□□□□□ -1.05
LMNB1-205ENST00000472034 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
LMNB1-205ENST00000472034 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
LMNB1-205ENST00000472034 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
LMNB1-205ENST00000472034 PITPNM1O00562 1244 aa8.49□□□□□ -1.05
LMNB1-205ENST00000472034 MAPKBP1O60336 1514 aa8.48□□□□□ -1.05
LMNB1-205ENST00000472034 SPATA31D1Q6ZQQ2 1576 aa8.47□□□□□ -1.05
LMNB1-205ENST00000472034 COL17A1Q9UMD9 1497 aaPredicted RBP8.46□□□□□ -1.05
LMNB1-205ENST00000472034 CCDC88BA6NC98 1476 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 VASPP50552 380 aaPredicted RBP8.45□□□□□ -1.06
LMNB1-205ENST00000472034 MIER1Q8N108 512 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 PBRM1Q86U86 1689 aa8.45□□□□□ -1.06
LMNB1-205ENST00000472034 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
LMNB1-205ENST00000472034 PPRC1Q5VV67 1664 aaKnown RBP8.43□□□□□ -1.06
LMNB1-205ENST00000472034 CHRDL2Q6WN34 429 aa8.43□□□□□ -1.06
LMNB1-205ENST00000472034 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
LMNB1-205ENST00000472034 NPM1P06748 294 aaKnown RBP eCLIP8.42□□□□□ -1.06
LMNB1-205ENST00000472034 NUP160Q12769 1436 aa8.42□□□□□ -1.06
LMNB1-205ENST00000472034 GRIN2AQ12879 1464 aa8.42□□□□□ -1.06
LMNB1-205ENST00000472034 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
LMNB1-205ENST00000472034 ZBTB47Q9UFB7 747 aaPredicted RBP8.41□□□□□ -1.06
LMNB1-205ENST00000472034 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
LMNB1-205ENST00000472034 KLHL34Q8N239 644 aa8.38□□□□□ -1.07
LMNB1-205ENST00000472034 TOP2BQ02880 1626 aa8.36□□□□□ -1.07
LMNB1-205ENST00000472034 CUX1P39880 1505 aa8.36□□□□□ -1.07
LMNB1-205ENST00000472034 ABCA5Q8WWZ7 1642 aa8.36□□□□□ -1.07
LMNB1-205ENST00000472034 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
LMNB1-205ENST00000472034 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 19.3
LMNB1-205ENST00000472034 JPH4Q96JJ6 628 aa8.33□□□□□ -1.08
LMNB1-205ENST00000472034 PRKAR2AP13861 404 aaKnown RBP8.32□□□□□ -1.08
LMNB1-205ENST00000472034 HSPA2P54652 639 aa8.32□□□□□ -1.08
LMNB1-205ENST00000472034 PCF11O94913 1555 aaKnown RBP8.31□□□□□ -1.08
LMNB1-205ENST00000472034 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
LMNB1-205ENST00000472034 KIF21BO75037 1637 aa8.31□□□□□ -1.08
LMNB1-205ENST00000472034 PTPRMP28827 1452 aa8.31□□□□□ -1.08
LMNB1-205ENST00000472034 PIP4P2Q8N4L2 257 aa8.3□□□□□ -1.08
LMNB1-205ENST00000472034 IFNLR1Q8IU57 520 aaPredicted RBP8.29□□□□□ -1.08
LMNB1-205ENST00000472034 GLI2P10070 1586 aa8.28□□□□□ -1.08
LMNB1-205ENST00000472034 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
LMNB1-205ENST00000472034 ABCA10Q8WWZ4 1543 aa8.28□□□□□ -1.08
LMNB1-205ENST00000472034 ASXL2Q76L83 1435 aa8.28□□□□□ -1.08
LMNB1-205ENST00000472034 SPOCK2Q92563 424 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms