RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.153e-6■□□□□ 8.1
FDPS-209ENST00000471117 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
FDPS-209ENST00000471117 MAPKBP1O60336 1514 aa14.09□□□□□ -0.15
FDPS-209ENST00000471117 SHROOM2Q13796 1616 aa14.08□□□□□ -0.15
FDPS-209ENST00000471117 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
FDPS-209ENST00000471117 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.16
FDPS-209ENST00000471117 NUP160Q12769 1436 aa14.01□□□□□ -0.17
FDPS-209ENST00000471117 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
FDPS-209ENST00000471117 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
FDPS-209ENST00000471117 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.17
FDPS-209ENST00000471117 CUX1P39880 1505 aa13.95□□□□□ -0.18
FDPS-209ENST00000471117 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
FDPS-209ENST00000471117 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
FDPS-209ENST00000471117 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
FDPS-209ENST00000471117 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
FDPS-209ENST00000471117 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
FDPS-209ENST00000471117 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
FDPS-209ENST00000471117 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
FDPS-209ENST00000471117 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
FDPS-209ENST00000471117 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
FDPS-209ENST00000471117 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
FDPS-209ENST00000471117 GLI2P10070 1586 aa13.8□□□□□ -0.2
FDPS-209ENST00000471117 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
FDPS-209ENST00000471117 KIF21BO75037 1637 aa13.79□□□□□ -0.2
FDPS-209ENST00000471117 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
FDPS-209ENST00000471117 ASXL2Q76L83 1435 aa13.77□□□□□ -0.21
FDPS-209ENST00000471117 PTPRMP28827 1452 aa13.76□□□□□ -0.21
FDPS-209ENST00000471117 HSPA2P54652 639 aa13.75□□□□□ -0.21
FDPS-209ENST00000471117 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
FDPS-209ENST00000471117 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
FDPS-209ENST00000471117 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
FDPS-209ENST00000471117 TEX14Q8IWB6 1497 aa13.73□□□□□ -0.21
FDPS-209ENST00000471117 CUL7Q14999 1698 aa13.72□□□□□ -0.21
FDPS-209ENST00000471117 ADAMTSL3P82987 1691 aa13.68□□□□□ -0.22
FDPS-209ENST00000471117 ABCC2Q92887 1545 aa13.68□□□□□ -0.22
FDPS-209ENST00000471117 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
FDPS-209ENST00000471117 PTPRGP23470 1445 aa13.66□□□□□ -0.22
FDPS-209ENST00000471117 FAM9AQ8IZU1 332 aaPredicted RBP13.64□□□□□ -0.23
FDPS-209ENST00000471117 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
FDPS-209ENST00000471117 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
FDPS-209ENST00000471117 EEA1Q15075 1411 aa13.63□□□□□ -0.23
FDPS-209ENST00000471117 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
FDPS-209ENST00000471117 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
FDPS-209ENST00000471117 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
FDPS-209ENST00000471117 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
FDPS-209ENST00000471117 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
FDPS-209ENST00000471117 BCORL1Q5H9F3 1711 aa13.55□□□□□ -0.24
FDPS-209ENST00000471117 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
FDPS-209ENST00000471117 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
FDPS-209ENST00000471117 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
FDPS-209ENST00000471117 ZCCHC11Q5TAX3 1644 aaKnown RBP13.52□□□□□ -0.25
FDPS-209ENST00000471117 UHRF1BP1LA0JNW5 1464 aa13.51□□□□□ -0.25
FDPS-209ENST00000471117 CD109Q6YHK3 1445 aa13.5□□□□□ -0.25
FDPS-209ENST00000471117 UACAQ9BZF9 1416 aa13.5□□□□□ -0.25
FDPS-209ENST00000471117 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
FDPS-209ENST00000471117 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
FDPS-209ENST00000471117 KDM5BQ9UGL1 1544 aa13.48□□□□□ -0.25
FDPS-209ENST00000471117 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
FDPS-209ENST00000471117 IGF1RP08069 1367 aa13.45□□□□□ -0.26
FDPS-209ENST00000471117 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
FDPS-209ENST00000471117 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
FDPS-209ENST00000471117 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
FDPS-209ENST00000471117 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
FDPS-209ENST00000471117 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
FDPS-209ENST00000471117 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
FDPS-209ENST00000471117 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
FDPS-209ENST00000471117 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
FDPS-209ENST00000471117 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
FDPS-209ENST00000471117 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
FDPS-209ENST00000471117 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
FDPS-209ENST00000471117 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
FDPS-209ENST00000471117 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
FDPS-209ENST00000471117 UBAP1LF5GYI3 381 aa13.34□□□□□ -0.27
FDPS-209ENST00000471117 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
FDPS-209ENST00000471117 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
FDPS-209ENST00000471117 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
FDPS-209ENST00000471117 MLECQ14165 292 aa13.32□□□□□ -0.28
FDPS-209ENST00000471117 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
FDPS-209ENST00000471117 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
FDPS-209ENST00000471117 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
FDPS-209ENST00000471117 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
FDPS-209ENST00000471117 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
FDPS-209ENST00000471117 FRMPD1Q5SYB0 1578 aa13.28□□□□□ -0.28
FDPS-209ENST00000471117 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
FDPS-209ENST00000471117 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.29
FDPS-209ENST00000471117 SIGLEC1Q9BZZ2 1709 aa13.27□□□□□ -0.29
FDPS-209ENST00000471117 PTPRTO14522 1441 aa13.26□□□□□ -0.29
FDPS-209ENST00000471117 HSPA1LP34931 641 aa13.26□□□□□ -0.29
FDPS-209ENST00000471117 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
FDPS-209ENST00000471117 POGZQ7Z3K3 1410 aa13.24□□□□□ -0.29
FDPS-209ENST00000471117 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
FDPS-209ENST00000471117 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
FDPS-209ENST00000471117 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
FDPS-209ENST00000471117 FANCAO15360 1455 aa13.22□□□□□ -0.29
FDPS-209ENST00000471117 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
FDPS-209ENST00000471117 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
FDPS-209ENST00000471117 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
FDPS-209ENST00000471117 KIAA0556O60303 1618 aa13.19□□□□□ -0.3
FDPS-209ENST00000471117 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
FDPS-209ENST00000471117 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms