RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 GSE1Q14687 1217 aa9.58□□□□□ -0.88
PRPF3-204ENST00000470824 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
PRPF3-204ENST00000470824 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRPF3-204ENST00000470824 NUBP1P53384 320 aa9.54□□□□□ -0.88
PRPF3-204ENST00000470824 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
PRPF3-204ENST00000470824 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
PRPF3-204ENST00000470824 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-204ENST00000470824 CHGAP10645 457 aaKnown RBP9.51□□□□□ -0.89
PRPF3-204ENST00000470824 VSIG10Q8N0Z9 540 aa9.51□□□□□ -0.89
PRPF3-204ENST00000470824 GABBR2O75899 941 aa9.5□□□□□ -0.89
PRPF3-204ENST00000470824 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
PRPF3-204ENST00000470824 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
PRPF3-204ENST00000470824 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
PRPF3-204ENST00000470824 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
PRPF3-204ENST00000470824 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
PRPF3-204ENST00000470824 CD44P16070 742 aaKnown RBP9.44□□□□□ -0.9
PRPF3-204ENST00000470824 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
PRPF3-204ENST00000470824 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-204ENST00000470824 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
PRPF3-204ENST00000470824 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
PRPF3-204ENST00000470824 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
PRPF3-204ENST00000470824 RASEFQ8IZ41 740 aa9.4□□□□□ -0.9
PRPF3-204ENST00000470824 BCANQ96GW7 911 aa9.37□□□□□ -0.91
PRPF3-204ENST00000470824 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
PRPF3-204ENST00000470824 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
PRPF3-204ENST00000470824 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
PRPF3-204ENST00000470824 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
PRPF3-204ENST00000470824 LHX8Q68G74 356 aa9.34□□□□□ -0.91
PRPF3-204ENST00000470824 STK25O00506 426 aa9.31□□□□□ -0.92
PRPF3-204ENST00000470824 PYGBP11216 843 aa9.31□□□□□ -0.92
PRPF3-204ENST00000470824 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
PRPF3-204ENST00000470824 ZRANB1Q9UGI0 708 aa9.3□□□□□ -0.92
PRPF3-204ENST00000470824 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
PRPF3-204ENST00000470824 NKX1-1Q15270 411 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-204ENST00000470824 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-204ENST00000470824 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
PRPF3-204ENST00000470824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-204ENST00000470824 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-204ENST00000470824 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-204ENST00000470824 STK24Q9Y6E0 443 aa9.25□□□□□ -0.93
PRPF3-204ENST00000470824 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-204ENST00000470824 CLCN6P51797 869 aa9.24□□□□□ -0.93
PRPF3-204ENST00000470824 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
PRPF3-204ENST00000470824 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
PRPF3-204ENST00000470824 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
PRPF3-204ENST00000470824 PAK3O75914 559 aaPredicted RBP9.21□□□□□ -0.94
PRPF3-204ENST00000470824 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
PRPF3-204ENST00000470824 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
PRPF3-204ENST00000470824 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
PRPF3-204ENST00000470824 PHF12Q96QT6 1004 aa9.15□□□□□ -0.94
PRPF3-204ENST00000470824 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
PRPF3-204ENST00000470824 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
PRPF3-204ENST00000470824 PSEN1P49768 467 aa9.11□□□□□ -0.95
PRPF3-204ENST00000470824 NBR1Q14596 966 aa9.1□□□□□ -0.95
PRPF3-204ENST00000470824 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
PRPF3-204ENST00000470824 MAP3K13O43283 966 aa9.05□□□□□ -0.96
PRPF3-204ENST00000470824 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
PRPF3-204ENST00000470824 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
PRPF3-204ENST00000470824 KIF12Q96FN5 646 aa9.05□□□□□ -0.96
PRPF3-204ENST00000470824 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
PRPF3-204ENST00000470824 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
PRPF3-204ENST00000470824 POTEB2H3BUK9 544 aa8.98□□□□□ -0.97
PRPF3-204ENST00000470824 SOX12O15370 315 aa8.98□□□□□ -0.97
PRPF3-204ENST00000470824 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
PRPF3-204ENST00000470824 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
PRPF3-204ENST00000470824 WDR70Q9NW82 654 aa8.98□□□□□ -0.97
PRPF3-204ENST00000470824 NLRP6P59044 892 aa8.97□□□□□ -0.97
PRPF3-204ENST00000470824 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
PRPF3-204ENST00000470824 OTUD5Q96G74 571 aa8.97□□□□□ -0.97
PRPF3-204ENST00000470824 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
PRPF3-204ENST00000470824 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
PRPF3-204ENST00000470824 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
PRPF3-204ENST00000470824 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
PRPF3-204ENST00000470824 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
PRPF3-204ENST00000470824 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-204ENST00000470824 ASTLQ6HA08 431 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-204ENST00000470824 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
PRPF3-204ENST00000470824 PPP1R37O75864 691 aa8.91□□□□□ -0.98
PRPF3-204ENST00000470824 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
PRPF3-204ENST00000470824 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
PRPF3-204ENST00000470824 C7P10643 843 aa8.88□□□□□ -0.99
PRPF3-204ENST00000470824 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
PRPF3-204ENST00000470824 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
PRPF3-204ENST00000470824 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
PRPF3-204ENST00000470824 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
PRPF3-204ENST00000470824 POTEMA6NI47 508 aa8.83□□□□□ -1
PRPF3-204ENST00000470824 BMP2KQ9NSY1 1161 aaPredicted RBP8.83□□□□□ -1
PRPF3-204ENST00000470824 TRPC6Q9Y210 931 aa8.83□□□□□ -1
PRPF3-204ENST00000470824 MS4A4AQ96JQ5 239 aa8.82□□□□□ -1
PRPF3-204ENST00000470824 POTEJP0CG39 1038 aa8.81□□□□□ -1
PRPF3-204ENST00000470824 PDE4AP27815 886 aa8.81□□□□□ -1
PRPF3-204ENST00000470824 TIE1P35590 1138 aa8.81□□□□□ -1
PRPF3-204ENST00000470824 E2F4Q16254 413 aa8.81□□□□□ -1
PRPF3-204ENST00000470824 POTEGQ6S5H5 508 aa8.8□□□□□ -1
PRPF3-204ENST00000470824 MAMSTRQ6ZN01 415 aa8.8□□□□□ -1
PRPF3-204ENST00000470824 ARHGEF1Q92888 912 aaKnown RBP8.8□□□□□ -1
PRPF3-204ENST00000470824 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
PRPF3-204ENST00000470824 TTLL13PA6NNM8 815 aa8.77□□□□□ -1.01
PRPF3-204ENST00000470824 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
PRPF3-204ENST00000470824 LARP6Q9BRS8 491 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms