RNA–Protein interactions for RNA: ENST00000470305.1

SECISBP2-205, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best)

Gene SECISBP2, Length 5,405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-205ENST00000470305 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.54
SECISBP2-205ENST00000470305 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
SECISBP2-205ENST00000470305 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
SECISBP2-205ENST00000470305 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
SECISBP2-205ENST00000470305 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
SECISBP2-205ENST00000470305 ZNF326Q5BKZ1 582 aaKnown RBP11.66□□□□□ -0.54
SECISBP2-205ENST00000470305 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
SECISBP2-205ENST00000470305 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
SECISBP2-205ENST00000470305 SOGA1O94964 1423 aa11.63□□□□□ -0.55
SECISBP2-205ENST00000470305 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
SECISBP2-205ENST00000470305 EEA1Q15075 1411 aa11.62□□□□□ -0.55
SECISBP2-205ENST00000470305 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
SECISBP2-205ENST00000470305 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
SECISBP2-205ENST00000470305 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
SECISBP2-205ENST00000470305 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
SECISBP2-205ENST00000470305 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
SECISBP2-205ENST00000470305 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
SECISBP2-205ENST00000470305 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
SECISBP2-205ENST00000470305 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
SECISBP2-205ENST00000470305 CFTRP13569 1480 aa11.58□□□□□ -0.56
SECISBP2-205ENST00000470305 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
SECISBP2-205ENST00000470305 OSCARQ8IYS5 282 aa11.55□□□□□ -0.56
SECISBP2-205ENST00000470305 CUX2O14529 1486 aa11.54□□□□□ -0.56
SECISBP2-205ENST00000470305 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
SECISBP2-205ENST00000470305 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
SECISBP2-205ENST00000470305 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
SECISBP2-205ENST00000470305 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
SECISBP2-205ENST00000470305 BECN1Q14457 450 aa11.5□□□□□ -0.57
SECISBP2-205ENST00000470305 NESP48681 1621 aa11.49□□□□□ -0.57
SECISBP2-205ENST00000470305 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
SECISBP2-205ENST00000470305 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
SECISBP2-205ENST00000470305 NOP58Q9Y2X3 529 aaKnown RBP11.49□□□□□ -0.57
SECISBP2-205ENST00000470305 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
SECISBP2-205ENST00000470305 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
SECISBP2-205ENST00000470305 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
SECISBP2-205ENST00000470305 CARMIL2Q6F5E8 1435 aa11.46□□□□□ -0.57
SECISBP2-205ENST00000470305 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
SECISBP2-205ENST00000470305 ARID4BQ4LE39 1312 aaPredicted RBP11.45□□□□□ -0.58
SECISBP2-205ENST00000470305 PTMSP20962 102 aa11.44□□□□□ -0.58
SECISBP2-205ENST00000470305 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
SECISBP2-205ENST00000470305 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
SECISBP2-205ENST00000470305 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
SECISBP2-205ENST00000470305 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
SECISBP2-205ENST00000470305 PKNOX2Q96KN3 472 aa11.42□□□□□ -0.58
SECISBP2-205ENST00000470305 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
SECISBP2-205ENST00000470305 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
SECISBP2-205ENST00000470305 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
SECISBP2-205ENST00000470305 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
SECISBP2-205ENST00000470305 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.59
SECISBP2-205ENST00000470305 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
SECISBP2-205ENST00000470305 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
SECISBP2-205ENST00000470305 MSNP26038 577 aaKnown RBP11.39□□□□□ -0.59
SECISBP2-205ENST00000470305 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
SECISBP2-205ENST00000470305 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
SECISBP2-205ENST00000470305 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
SECISBP2-205ENST00000470305 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
SECISBP2-205ENST00000470305 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
SECISBP2-205ENST00000470305 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
SECISBP2-205ENST00000470305 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
SECISBP2-205ENST00000470305 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
SECISBP2-205ENST00000470305 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
SECISBP2-205ENST00000470305 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
SECISBP2-205ENST00000470305 ARID3AQ99856 593 aa11.33□□□□□ -0.6
SECISBP2-205ENST00000470305 APPP05067 770 aa11.31□□□□□ -0.6
SECISBP2-205ENST00000470305 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
SECISBP2-205ENST00000470305 FAM9BQ8IZU0 186 aa11.31□□□□□ -0.6
SECISBP2-205ENST00000470305 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
SECISBP2-205ENST00000470305 RAPGEF2Q9Y4G8 1499 aa11.3□□□□□ -0.6
SECISBP2-205ENST00000470305 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
SECISBP2-205ENST00000470305 MIER1Q8N108 512 aa11.29□□□□□ -0.6
SECISBP2-205ENST00000470305 FAM50AQ14320 339 aaKnown RBP11.29□□□□□ -0.6
SECISBP2-205ENST00000470305 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
SECISBP2-205ENST00000470305 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
SECISBP2-205ENST00000470305 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.61
SECISBP2-205ENST00000470305 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
SECISBP2-205ENST00000470305 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
SECISBP2-205ENST00000470305 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
SECISBP2-205ENST00000470305 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
SECISBP2-205ENST00000470305 NRDCO43847 1150 aa11.24□□□□□ -0.61
SECISBP2-205ENST00000470305 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
SECISBP2-205ENST00000470305 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
SECISBP2-205ENST00000470305 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
SECISBP2-205ENST00000470305 CLIP1P30622 1438 aa11.24□□□□□ -0.61
SECISBP2-205ENST00000470305 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
SECISBP2-205ENST00000470305 ZNF777Q9ULD5 760 aaPredicted RBP11.23□□□□□ -0.61
SECISBP2-205ENST00000470305 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
SECISBP2-205ENST00000470305 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
SECISBP2-205ENST00000470305 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
SECISBP2-205ENST00000470305 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
SECISBP2-205ENST00000470305 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 PTPRGP23470 1445 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 CUX1P39880 1505 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 WDR62O43379 1518 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
SECISBP2-205ENST00000470305 PPP4R2Q9NY27 417 aa11.19□□□□□ -0.62
SECISBP2-205ENST00000470305 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
SECISBP2-205ENST00000470305 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
SECISBP2-205ENST00000470305 SYNJ2O15056 1496 aa11.18□□□□□ -0.62
SECISBP2-205ENST00000470305 IGF1RP08069 1367 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms