RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
SEC16A-208ENST00000467838 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
SEC16A-208ENST00000467838 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
SEC16A-208ENST00000467838 MAPKBP1O60336 1514 aa21.14■□□□□ 0.97
SEC16A-208ENST00000467838 CFAP43Q8NDM7 1665 aa21.12■□□□□ 0.97
SEC16A-208ENST00000467838 IGF1RP08069 1367 aa21.11■□□□□ 0.97
SEC16A-208ENST00000467838 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.96
SEC16A-208ENST00000467838 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
SEC16A-208ENST00000467838 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
SEC16A-208ENST00000467838 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
SEC16A-208ENST00000467838 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
SEC16A-208ENST00000467838 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.95
SEC16A-208ENST00000467838 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
SEC16A-208ENST00000467838 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
SEC16A-208ENST00000467838 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
SEC16A-208ENST00000467838 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
SEC16A-208ENST00000467838 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
SEC16A-208ENST00000467838 WDR62O43379 1518 aa20.95■□□□□ 0.94
SEC16A-208ENST00000467838 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.94
SEC16A-208ENST00000467838 SUPT16HQ9Y5B9 1047 aaKnown RBP20.94■□□□□ 0.94
SEC16A-208ENST00000467838 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
SEC16A-208ENST00000467838 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
SEC16A-208ENST00000467838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.94
SEC16A-208ENST00000467838 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.941e-7■■■■□ 24.7
SEC16A-208ENST00000467838 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
SEC16A-208ENST00000467838 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
SEC16A-208ENST00000467838 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
SEC16A-208ENST00000467838 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
SEC16A-208ENST00000467838 CUL7Q14999 1698 aa20.85■□□□□ 0.93
SEC16A-208ENST00000467838 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
SEC16A-208ENST00000467838 ITGAEP38570 1179 aa20.84■□□□□ 0.93
SEC16A-208ENST00000467838 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
SEC16A-208ENST00000467838 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
SEC16A-208ENST00000467838 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
SEC16A-208ENST00000467838 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
SEC16A-208ENST00000467838 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
SEC16A-208ENST00000467838 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
SEC16A-208ENST00000467838 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
SEC16A-208ENST00000467838 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
SEC16A-208ENST00000467838 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
SEC16A-208ENST00000467838 FGD6Q6ZV73 1430 aa20.71■□□□□ 0.91
SEC16A-208ENST00000467838 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
SEC16A-208ENST00000467838 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
SEC16A-208ENST00000467838 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
SEC16A-208ENST00000467838 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
SEC16A-208ENST00000467838 KCNH8Q96L42 1107 aa20.68■□□□□ 0.9
SEC16A-208ENST00000467838 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
SEC16A-208ENST00000467838 HFM1A2PYH4 1435 aa20.66■□□□□ 0.9
SEC16A-208ENST00000467838 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
SEC16A-208ENST00000467838 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
SEC16A-208ENST00000467838 CCDC18Q5T9S5 1454 aa20.64■□□□□ 0.89
SEC16A-208ENST00000467838 CCER2I3L3R5 266 aa20.64■□□□□ 0.89
SEC16A-208ENST00000467838 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.89
SEC16A-208ENST00000467838 UACAQ9BZF9 1416 aa20.63■□□□□ 0.89
SEC16A-208ENST00000467838 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
SEC16A-208ENST00000467838 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
SEC16A-208ENST00000467838 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
SEC16A-208ENST00000467838 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
SEC16A-208ENST00000467838 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
SEC16A-208ENST00000467838 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
SEC16A-208ENST00000467838 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
SEC16A-208ENST00000467838 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
SEC16A-208ENST00000467838 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
SEC16A-208ENST00000467838 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
SEC16A-208ENST00000467838 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
SEC16A-208ENST00000467838 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
SEC16A-208ENST00000467838 NAIPQ13075 1403 aa20.54■□□□□ 0.88
SEC16A-208ENST00000467838 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
SEC16A-208ENST00000467838 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.88
SEC16A-208ENST00000467838 TONSLQ96HA7 1378 aa20.52■□□□□ 0.88
SEC16A-208ENST00000467838 GCC2Q8IWJ2 1684 aa20.51■□□□□ 0.87
SEC16A-208ENST00000467838 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
SEC16A-208ENST00000467838 ANP32CO43423 234 aa20.48■□□□□ 0.87
SEC16A-208ENST00000467838 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
SEC16A-208ENST00000467838 TCOF1Q13428 1488 aaKnown RBP20.48■□□□□ 0.87
SEC16A-208ENST00000467838 AKNAQ7Z591 1439 aa20.48■□□□□ 0.87
SEC16A-208ENST00000467838 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
SEC16A-208ENST00000467838 FKBP8Q14318 412 aa20.45■□□□□ 0.86
SEC16A-208ENST00000467838 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
SEC16A-208ENST00000467838 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.85
SEC16A-208ENST00000467838 NEFLP07196 543 aa20.38■□□□□ 0.85
SEC16A-208ENST00000467838 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
SEC16A-208ENST00000467838 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
SEC16A-208ENST00000467838 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
SEC16A-208ENST00000467838 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
SEC16A-208ENST00000467838 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
SEC16A-208ENST00000467838 BCANQ96GW7 911 aa20.35■□□□□ 0.85
SEC16A-208ENST00000467838 FBLN2P98095 1184 aa20.32■□□□□ 0.84
SEC16A-208ENST00000467838 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
SEC16A-208ENST00000467838 TRIM52Q96A61 297 aa20.32■□□□□ 0.84
SEC16A-208ENST00000467838 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
SEC16A-208ENST00000467838 KDM6BO15054 1643 aa20.29■□□□□ 0.84
SEC16A-208ENST00000467838 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
SEC16A-208ENST00000467838 KIAA0586Q9BVV6 1533 aa20.26■□□□□ 0.83
SEC16A-208ENST00000467838 CEP170Q5SW79 1584 aa20.26■□□□□ 0.83
SEC16A-208ENST00000467838 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
SEC16A-208ENST00000467838 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
SEC16A-208ENST00000467838 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
SEC16A-208ENST00000467838 NUP160Q12769 1436 aa20.22■□□□□ 0.83
SEC16A-208ENST00000467838 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms