RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 FAM50AQ14320 339 aaKnown RBP30.97■■■□□ 2.55
LINC01140-202ENST00000467438 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
LINC01140-202ENST00000467438 SIN3AQ96ST3 1273 aa30.9■■■□□ 2.54
LINC01140-202ENST00000467438 SETD5Q9C0A6 1442 aa30.88■■■□□ 2.53
LINC01140-202ENST00000467438 MAP3K1Q13233 1512 aa30.88■■■□□ 2.53
LINC01140-202ENST00000467438 KCNH8Q96L42 1107 aa30.87■■■□□ 2.53
LINC01140-202ENST00000467438 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
LINC01140-202ENST00000467438 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
LINC01140-202ENST00000467438 FHOD3Q2V2M9 1422 aa30.86■■■□□ 2.53
LINC01140-202ENST00000467438 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
LINC01140-202ENST00000467438 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
LINC01140-202ENST00000467438 NESP48681 1621 aa30.76■■■□□ 2.51
LINC01140-202ENST00000467438 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
LINC01140-202ENST00000467438 CFAP43Q8NDM7 1665 aa30.73■■■□□ 2.51
LINC01140-202ENST00000467438 SUPT16HQ9Y5B9 1047 aaKnown RBP30.72■■■□□ 2.51
LINC01140-202ENST00000467438 POLA1P09884 1462 aaPredicted RBP30.72■■■□□ 2.51
LINC01140-202ENST00000467438 HIRIP3Q9BW71 556 aaPredicted RBP30.69■■■□□ 2.5
LINC01140-202ENST00000467438 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
LINC01140-202ENST00000467438 DDX10Q13206 875 aaKnown RBP30.66■■■□□ 2.5
LINC01140-202ENST00000467438 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
LINC01140-202ENST00000467438 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
LINC01140-202ENST00000467438 FYCO1Q9BQS8 1478 aa30.59■■■□□ 2.49
LINC01140-202ENST00000467438 CASKIN1Q8WXD9 1431 aa30.59■■■□□ 2.49
LINC01140-202ENST00000467438 EFCAB5A4FU69 1503 aa30.52■■■□□ 2.48
LINC01140-202ENST00000467438 TDRD9Q8NDG6 1382 aaKnown RBP30.52■■■□□ 2.48
LINC01140-202ENST00000467438 CTTNBP2Q8WZ74 1663 aa30.48■■■□□ 2.47
LINC01140-202ENST00000467438 PPP1R15AO75807 674 aaPredicted RBP30.47■■■□□ 2.47
LINC01140-202ENST00000467438 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
LINC01140-202ENST00000467438 CUL7Q14999 1698 aa30.46■■■□□ 2.47
LINC01140-202ENST00000467438 PTPRKQ15262 1439 aa30.46■■■□□ 2.47
LINC01140-202ENST00000467438 AQRO60306 1485 aaKnown RBP eCLIP30.46■■■□□ 2.47
LINC01140-202ENST00000467438 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
LINC01140-202ENST00000467438 SNAPC4Q5SXM2 1469 aa30.46■■■□□ 2.47
LINC01140-202ENST00000467438 MTUS2Q5JR59 1369 aa30.43■■■□□ 2.46
LINC01140-202ENST00000467438 FMN1Q68DA7 1419 aa30.42■■■□□ 2.46
LINC01140-202ENST00000467438 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
LINC01140-202ENST00000467438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.39■■■□□ 2.46
LINC01140-202ENST00000467438 LRRIQ1Q96JM4 1722 aa30.37■■■□□ 2.45
LINC01140-202ENST00000467438 CCDC18Q5T9S5 1454 aa30.36■■■□□ 2.45
LINC01140-202ENST00000467438 TIMELESSQ9UNS1 1208 aa30.35■■■□□ 2.45
LINC01140-202ENST00000467438 BCANQ96GW7 911 aa30.34■■■□□ 2.45
LINC01140-202ENST00000467438 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
LINC01140-202ENST00000467438 GAPVD1Q14C86 1478 aa30.29■■■□□ 2.44
LINC01140-202ENST00000467438 NCOA2Q15596 1464 aa30.29■■■□□ 2.44
LINC01140-202ENST00000467438 SAMD9Q5K651 1589 aa30.27■■■□□ 2.44
LINC01140-202ENST00000467438 HFM1A2PYH4 1435 aa30.27■■■□□ 2.44
LINC01140-202ENST00000467438 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.44
LINC01140-202ENST00000467438 TRIM52Q96A61 297 aa30.26■■■□□ 2.43
LINC01140-202ENST00000467438 PTPN23Q9H3S7 1636 aa30.26■■■□□ 2.43
LINC01140-202ENST00000467438 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
LINC01140-202ENST00000467438 TSHZ2Q9NRE2 1034 aa30.25■■■□□ 2.43
LINC01140-202ENST00000467438 NAIPQ13075 1403 aa30.24■■■□□ 2.43
LINC01140-202ENST00000467438 UACAQ9BZF9 1416 aa30.23■■■□□ 2.43
LINC01140-202ENST00000467438 MYOM3Q5VTT5 1437 aa30.23■■■□□ 2.43
LINC01140-202ENST00000467438 CHIC2Q9UKJ5 165 aa30.22■■■□□ 2.43
LINC01140-202ENST00000467438 FKBP8Q14318 412 aa30.21■■■□□ 2.43
LINC01140-202ENST00000467438 RRP7BPQ9NSQ0 103 aa30.21■■■□□ 2.43
LINC01140-202ENST00000467438 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
LINC01140-202ENST00000467438 ANP32CO43423 234 aa30.2■■■□□ 2.42
LINC01140-202ENST00000467438 MAGI3Q5TCQ9 1506 aa30.19■■■□□ 2.42
LINC01140-202ENST00000467438 ARID3CA6NKF2 412 aa30.18■■■□□ 2.42
LINC01140-202ENST00000467438 SUPT6HQ7KZ85 1726 aaKnown RBP30.12■■■□□ 2.41
LINC01140-202ENST00000467438 CCER2I3L3R5 266 aa30.1■■■□□ 2.41
LINC01140-202ENST00000467438 EHBP1L1Q8N3D4 1523 aa30.08■■■□□ 2.41
LINC01140-202ENST00000467438 MYT1Q01538 1121 aa30.08■■■□□ 2.41
LINC01140-202ENST00000467438 KDM5BQ9UGL1 1544 aa30.08■■■□□ 2.41
LINC01140-202ENST00000467438 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
LINC01140-202ENST00000467438 UGGT2Q9NYU1 1516 aa30.07■■■□□ 2.4
LINC01140-202ENST00000467438 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.4
LINC01140-202ENST00000467438 DENND4BO75064 1496 aaPredicted RBP30.02■■■□□ 2.4
LINC01140-202ENST00000467438 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
LINC01140-202ENST00000467438 THOC2Q8NI27 1593 aaKnown RBP30.01■■■□□ 2.4
LINC01140-202ENST00000467438 KDM6BO15054 1643 aa30.01■■■□□ 2.39
LINC01140-202ENST00000467438 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
LINC01140-202ENST00000467438 FOXD1Q16676 465 aa29.99■■■□□ 2.39
LINC01140-202ENST00000467438 CDK13Q14004 1512 aaKnown RBP29.98■■■□□ 2.39
LINC01140-202ENST00000467438 HSPA5P11021 654 aaKnown RBP29.94■■■□□ 2.38
LINC01140-202ENST00000467438 EPRSP07814 1512 aaKnown RBP29.92■■■□□ 2.38
LINC01140-202ENST00000467438 WASHC2AQ641Q2 1341 aa29.92■■■□□ 2.38
LINC01140-202ENST00000467438 TCOF1Q13428 1488 aaKnown RBP29.9■■■□□ 2.38
LINC01140-202ENST00000467438 NEFLP07196 543 aa29.89■■■□□ 2.37
LINC01140-202ENST00000467438 HECW1Q76N89 1606 aa29.88■■■□□ 2.37
LINC01140-202ENST00000467438 MPHOSPH9Q99550 1183 aa29.88■■■□□ 2.37
LINC01140-202ENST00000467438 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
LINC01140-202ENST00000467438 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
LINC01140-202ENST00000467438 GCC2Q8IWJ2 1684 aa29.84■■■□□ 2.37
LINC01140-202ENST00000467438 L3MBTL2Q969R5 705 aa29.83■■■□□ 2.37
LINC01140-202ENST00000467438 HNRNPUQ00839 825 aaKnown RBP eCLIP29.82■■■□□ 2.36
LINC01140-202ENST00000467438 ZNF644Q9H582 1327 aaPredicted RBP29.81■■■□□ 2.36
LINC01140-202ENST00000467438 C11orf95C9JLR9 678 aaPredicted RBP29.79■■■□□ 2.36
LINC01140-202ENST00000467438 ADAMTS12P58397 1594 aa29.79■■■□□ 2.36
LINC01140-202ENST00000467438 CCDC184Q52MB2 194 aa29.78■■■□□ 2.36
LINC01140-202ENST00000467438 WDR62O43379 1518 aa29.78■■■□□ 2.36
LINC01140-202ENST00000467438 EIF4G2P78344 907 aaKnown RBP eCLIP29.76■■■□□ 2.35
LINC01140-202ENST00000467438 IRX6P78412 446 aaPredicted RBP29.76■■■□□ 2.35
LINC01140-202ENST00000467438 MIA2Q96PC5 1412 aa29.74■■■□□ 2.35
LINC01140-202ENST00000467438 ZNF608Q9ULD9 1512 aaPredicted RBP29.72■■■□□ 2.35
LINC01140-202ENST00000467438 AKNAQ7Z591 1439 aa29.71■■■□□ 2.35
LINC01140-202ENST00000467438 NBPF8Q3BBV2 869 aa29.71■■■□□ 2.35
LINC01140-202ENST00000467438 DAPK1P53355 1430 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms