RNA–Protein interactions for RNA: ENST00000464876.5

ABCA2-212, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 3,438 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-212ENST00000464876 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
ABCA2-212ENST00000464876 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
ABCA2-212ENST00000464876 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
ABCA2-212ENST00000464876 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
ABCA2-212ENST00000464876 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
ABCA2-212ENST00000464876 HNRNPUQ00839 825 aaKnown RBP eCLIP19.44■□□□□ 0.7
ABCA2-212ENST00000464876 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
ABCA2-212ENST00000464876 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
ABCA2-212ENST00000464876 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
ABCA2-212ENST00000464876 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
ABCA2-212ENST00000464876 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
ABCA2-212ENST00000464876 ERICH3Q5RHP9 1530 aa19.38■□□□□ 0.69
ABCA2-212ENST00000464876 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
ABCA2-212ENST00000464876 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
ABCA2-212ENST00000464876 CFTRP13569 1480 aa19.37■□□□□ 0.69
ABCA2-212ENST00000464876 MAPKBP1O60336 1514 aa19.36■□□□□ 0.69
ABCA2-212ENST00000464876 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
ABCA2-212ENST00000464876 CUX1P39880 1505 aa19.33■□□□□ 0.69
ABCA2-212ENST00000464876 NESP48681 1621 aa19.33■□□□□ 0.68
ABCA2-212ENST00000464876 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
ABCA2-212ENST00000464876 CUX2O14529 1486 aa19.32■□□□□ 0.68
ABCA2-212ENST00000464876 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
ABCA2-212ENST00000464876 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
ABCA2-212ENST00000464876 MSH5O43196 834 aa19.25■□□□□ 0.67
ABCA2-212ENST00000464876 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
ABCA2-212ENST00000464876 IGF1RP08069 1367 aa19.23■□□□□ 0.67
ABCA2-212ENST00000464876 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
ABCA2-212ENST00000464876 LRRC9Q6ZRR7 1453 aa19.22■□□□□ 0.67
ABCA2-212ENST00000464876 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
ABCA2-212ENST00000464876 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
ABCA2-212ENST00000464876 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
ABCA2-212ENST00000464876 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
ABCA2-212ENST00000464876 TIMELESSQ9UNS1 1208 aa19.18■□□□□ 0.66
ABCA2-212ENST00000464876 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
ABCA2-212ENST00000464876 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
ABCA2-212ENST00000464876 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
ABCA2-212ENST00000464876 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
ABCA2-212ENST00000464876 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
ABCA2-212ENST00000464876 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
ABCA2-212ENST00000464876 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
ABCA2-212ENST00000464876 MTUS2Q5JR59 1369 aa19.12■□□□□ 0.65
ABCA2-212ENST00000464876 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
ABCA2-212ENST00000464876 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
ABCA2-212ENST00000464876 CCDC184Q52MB2 194 aa19.09■□□□□ 0.65
ABCA2-212ENST00000464876 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
ABCA2-212ENST00000464876 NBR1Q14596 966 aa19.07■□□□□ 0.64
ABCA2-212ENST00000464876 FOXD1Q16676 465 aa19.06■□□□□ 0.64
ABCA2-212ENST00000464876 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
ABCA2-212ENST00000464876 PPP4R2Q9NY27 417 aa19.03■□□□□ 0.64
ABCA2-212ENST00000464876 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
ABCA2-212ENST00000464876 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
ABCA2-212ENST00000464876 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
ABCA2-212ENST00000464876 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
ABCA2-212ENST00000464876 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
ABCA2-212ENST00000464876 ZNF326Q5BKZ1 582 aaKnown RBP18.98■□□□□ 0.63
ABCA2-212ENST00000464876 FGD6Q6ZV73 1430 aa18.97■□□□□ 0.63
ABCA2-212ENST00000464876 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
ABCA2-212ENST00000464876 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
ABCA2-212ENST00000464876 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
ABCA2-212ENST00000464876 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
ABCA2-212ENST00000464876 DEKP35659 375 aaKnown RBP18.93■□□□□ 0.62
ABCA2-212ENST00000464876 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
ABCA2-212ENST00000464876 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
ABCA2-212ENST00000464876 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
ABCA2-212ENST00000464876 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
ABCA2-212ENST00000464876 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.628e-7■■■□□ 15.2
ABCA2-212ENST00000464876 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
ABCA2-212ENST00000464876 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
ABCA2-212ENST00000464876 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
ABCA2-212ENST00000464876 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
ABCA2-212ENST00000464876 CASKIN1Q8WXD9 1431 aa18.87■□□□□ 0.61
ABCA2-212ENST00000464876 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
ABCA2-212ENST00000464876 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
ABCA2-212ENST00000464876 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
ABCA2-212ENST00000464876 NAIPQ13075 1403 aa18.85■□□□□ 0.61
ABCA2-212ENST00000464876 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
ABCA2-212ENST00000464876 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
ABCA2-212ENST00000464876 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
ABCA2-212ENST00000464876 PAK3O75914 559 aaPredicted RBP18.84■□□□□ 0.61
ABCA2-212ENST00000464876 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
ABCA2-212ENST00000464876 SALL2Q9Y467 1007 aaPredicted RBP18.83■□□□□ 0.6
ABCA2-212ENST00000464876 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
ABCA2-212ENST00000464876 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
ABCA2-212ENST00000464876 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
ABCA2-212ENST00000464876 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
ABCA2-212ENST00000464876 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
ABCA2-212ENST00000464876 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
ABCA2-212ENST00000464876 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
ABCA2-212ENST00000464876 ZBED9Q6R2W3 1325 aa18.78■□□□□ 0.6
ABCA2-212ENST00000464876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
ABCA2-212ENST00000464876 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
ABCA2-212ENST00000464876 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
ABCA2-212ENST00000464876 CCDC7Q96M83 1385 aa18.77■□□□□ 0.6
ABCA2-212ENST00000464876 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.6
ABCA2-212ENST00000464876 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
ABCA2-212ENST00000464876 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
ABCA2-212ENST00000464876 AKNAQ7Z591 1439 aa18.75■□□□□ 0.59
ABCA2-212ENST00000464876 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
ABCA2-212ENST00000464876 ZNF777Q9ULD5 760 aaPredicted RBP18.74■□□□□ 0.59
ABCA2-212ENST00000464876 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms