RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
VAMP7-204ENST00000463317 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
VAMP7-204ENST00000463317 SOGA1O94964 1423 aa11.53□□□□□ -0.56
VAMP7-204ENST00000463317 CEP170Q5SW79 1584 aa11.53□□□□□ -0.56
VAMP7-204ENST00000463317 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
VAMP7-204ENST00000463317 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
VAMP7-204ENST00000463317 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
VAMP7-204ENST00000463317 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
VAMP7-204ENST00000463317 NUP160Q12769 1436 aa11.42□□□□□ -0.58
VAMP7-204ENST00000463317 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
VAMP7-204ENST00000463317 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
VAMP7-204ENST00000463317 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
VAMP7-204ENST00000463317 GRIN2AQ12879 1464 aa11.4□□□□□ -0.58
VAMP7-204ENST00000463317 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
VAMP7-204ENST00000463317 SPATA31D1Q6ZQQ2 1576 aa11.39□□□□□ -0.59
VAMP7-204ENST00000463317 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
VAMP7-204ENST00000463317 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
VAMP7-204ENST00000463317 PPRC1Q5VV67 1664 aaKnown RBP11.36□□□□□ -0.59
VAMP7-204ENST00000463317 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
VAMP7-204ENST00000463317 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
VAMP7-204ENST00000463317 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
VAMP7-204ENST00000463317 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
VAMP7-204ENST00000463317 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
VAMP7-204ENST00000463317 GLI2P10070 1586 aa11.27□□□□□ -0.61
VAMP7-204ENST00000463317 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
VAMP7-204ENST00000463317 CUX1P39880 1505 aa11.26□□□□□ -0.61
VAMP7-204ENST00000463317 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
VAMP7-204ENST00000463317 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
VAMP7-204ENST00000463317 SCAF1Q9H7N4 1312 aaKnown RBP11.22□□□□□ -0.61
VAMP7-204ENST00000463317 PTPRMP28827 1452 aa11.21□□□□□ -0.61
VAMP7-204ENST00000463317 MAPK8IP2Q13387 824 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-204ENST00000463317 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
VAMP7-204ENST00000463317 PLB1Q6P1J6 1458 aa11.18□□□□□ -0.62
VAMP7-204ENST00000463317 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
VAMP7-204ENST00000463317 TEX14Q8IWB6 1497 aa11.17□□□□□ -0.62
VAMP7-204ENST00000463317 MAP3K4Q9Y6R4 1608 aa11.17□□□□□ -0.62
VAMP7-204ENST00000463317 ADAMTSL3P82987 1691 aa11.15□□□□□ -0.62
VAMP7-204ENST00000463317 KIF21BO75037 1637 aa11.15□□□□□ -0.62
VAMP7-204ENST00000463317 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
VAMP7-204ENST00000463317 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
VAMP7-204ENST00000463317 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
VAMP7-204ENST00000463317 EPRSP07814 1512 aaKnown RBP11.11□□□□□ -0.63
VAMP7-204ENST00000463317 HSPA2P54652 639 aa11.11□□□□□ -0.63
VAMP7-204ENST00000463317 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
VAMP7-204ENST00000463317 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
VAMP7-204ENST00000463317 ERICH3Q5RHP9 1530 aa11.07□□□□□ -0.64
VAMP7-204ENST00000463317 PTPRGP23470 1445 aa11.05□□□□□ -0.64
VAMP7-204ENST00000463317 CUL7Q14999 1698 aa11.04□□□□□ -0.64
VAMP7-204ENST00000463317 MADDQ8WXG6 1647 aa11.02□□□□□ -0.64
VAMP7-204ENST00000463317 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
VAMP7-204ENST00000463317 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
VAMP7-204ENST00000463317 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
VAMP7-204ENST00000463317 MAGI3Q5TCQ9 1506 aa10.99□□□□□ -0.65
VAMP7-204ENST00000463317 KDM5BQ9UGL1 1544 aa10.97□□□□□ -0.65
VAMP7-204ENST00000463317 TNIKQ9UKE5 1360 aa10.95□□□□□ -0.66
VAMP7-204ENST00000463317 RIMS1Q86UR5 1692 aaKnown RBP10.95□□□□□ -0.66
VAMP7-204ENST00000463317 ARAP3Q8WWN8 1544 aa10.94□□□□□ -0.66
VAMP7-204ENST00000463317 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
VAMP7-204ENST00000463317 CD109Q6YHK3 1445 aa10.93□□□□□ -0.66
VAMP7-204ENST00000463317 UACAQ9BZF9 1416 aa10.93□□□□□ -0.66
VAMP7-204ENST00000463317 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
VAMP7-204ENST00000463317 YEATS2Q9ULM3 1422 aa10.92□□□□□ -0.66
VAMP7-204ENST00000463317 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
VAMP7-204ENST00000463317 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
VAMP7-204ENST00000463317 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
VAMP7-204ENST00000463317 STRCQ7RTU9 1775 aa10.91□□□□□ -0.66
VAMP7-204ENST00000463317 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
VAMP7-204ENST00000463317 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
VAMP7-204ENST00000463317 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
VAMP7-204ENST00000463317 ARID4BQ4LE39 1312 aaPredicted RBP10.87□□□□□ -0.67
VAMP7-204ENST00000463317 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
VAMP7-204ENST00000463317 PTPRTO14522 1441 aa10.85□□□□□ -0.67
VAMP7-204ENST00000463317 BIVM-ERCC5R4GMW8 1640 aa10.83□□□□□ -0.68
VAMP7-204ENST00000463317 PREX1Q8TCU6 1659 aa10.82□□□□□ -0.68
VAMP7-204ENST00000463317 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
VAMP7-204ENST00000463317 PHLDB1Q86UU1 1377 aa10.8□□□□□ -0.68
VAMP7-204ENST00000463317 FRMPD1Q5SYB0 1578 aa10.79□□□□□ -0.68
VAMP7-204ENST00000463317 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
VAMP7-204ENST00000463317 UBAP1LF5GYI3 381 aa10.79□□□□□ -0.68
VAMP7-204ENST00000463317 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
VAMP7-204ENST00000463317 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
VAMP7-204ENST00000463317 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
VAMP7-204ENST00000463317 ARHGEF40Q8TER5 1519 aa10.77□□□□□ -0.69
VAMP7-204ENST00000463317 HSPA1LP34931 641 aa10.76□□□□□ -0.69
VAMP7-204ENST00000463317 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
VAMP7-204ENST00000463317 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
VAMP7-204ENST00000463317 FER1L4A9Z1Z3 1794 aa10.73□□□□□ -0.69
VAMP7-204ENST00000463317 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
VAMP7-204ENST00000463317 IGF1RP08069 1367 aa10.73□□□□□ -0.69
VAMP7-204ENST00000463317 FANCAO15360 1455 aa10.73□□□□□ -0.69
VAMP7-204ENST00000463317 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
VAMP7-204ENST00000463317 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
VAMP7-204ENST00000463317 NEO1Q92859 1461 aa10.72□□□□□ -0.69
VAMP7-204ENST00000463317 UHRF1BP1Q6BDS2 1440 aa10.71□□□□□ -0.69
VAMP7-204ENST00000463317 CEBPAP49715 358 aaPredicted RBP10.69□□□□□ -0.7
VAMP7-204ENST00000463317 SETD1BQ9UPS6 1966 aaKnown RBP10.68□□□□□ -0.7
VAMP7-204ENST00000463317 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
VAMP7-204ENST00000463317 ABCA9Q8IUA7 1624 aa10.67□□□□□ -0.7
VAMP7-204ENST00000463317 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
VAMP7-204ENST00000463317 RGS17Q9UGC6 210 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms