RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
VAMP7-204ENST00000463317 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
VAMP7-204ENST00000463317 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
VAMP7-204ENST00000463317 ABCC9O60706 1549 aa15.17■□□□□ 0.02
VAMP7-204ENST00000463317 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
VAMP7-204ENST00000463317 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.09
VAMP7-204ENST00000463317 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
VAMP7-204ENST00000463317 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
VAMP7-204ENST00000463317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
VAMP7-204ENST00000463317 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
VAMP7-204ENST00000463317 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-204ENST00000463317 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
VAMP7-204ENST00000463317 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
VAMP7-204ENST00000463317 NACADO15069 1562 aa13.73□□□□□ -0.21
VAMP7-204ENST00000463317 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
VAMP7-204ENST00000463317 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
VAMP7-204ENST00000463317 CUX2O14529 1486 aa13.47□□□□□ -0.25
VAMP7-204ENST00000463317 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
VAMP7-204ENST00000463317 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
VAMP7-204ENST00000463317 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
VAMP7-204ENST00000463317 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
VAMP7-204ENST00000463317 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
VAMP7-204ENST00000463317 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
VAMP7-204ENST00000463317 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
VAMP7-204ENST00000463317 FOXD1Q16676 465 aa12.96□□□□□ -0.33
VAMP7-204ENST00000463317 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
VAMP7-204ENST00000463317 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
VAMP7-204ENST00000463317 NESP48681 1621 aa12.79□□□□□ -0.36
VAMP7-204ENST00000463317 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
VAMP7-204ENST00000463317 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
VAMP7-204ENST00000463317 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
VAMP7-204ENST00000463317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
VAMP7-204ENST00000463317 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
VAMP7-204ENST00000463317 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
VAMP7-204ENST00000463317 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
VAMP7-204ENST00000463317 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
VAMP7-204ENST00000463317 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
VAMP7-204ENST00000463317 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
VAMP7-204ENST00000463317 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
VAMP7-204ENST00000463317 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
VAMP7-204ENST00000463317 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
VAMP7-204ENST00000463317 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
VAMP7-204ENST00000463317 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
VAMP7-204ENST00000463317 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
VAMP7-204ENST00000463317 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
VAMP7-204ENST00000463317 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
VAMP7-204ENST00000463317 WDR62O43379 1518 aa12.46□□□□□ -0.42
VAMP7-204ENST00000463317 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
VAMP7-204ENST00000463317 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
VAMP7-204ENST00000463317 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
VAMP7-204ENST00000463317 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
VAMP7-204ENST00000463317 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
VAMP7-204ENST00000463317 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
VAMP7-204ENST00000463317 ADRA2BP18089 450 aa12.27□□□□□ -0.45
VAMP7-204ENST00000463317 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
VAMP7-204ENST00000463317 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
VAMP7-204ENST00000463317 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
VAMP7-204ENST00000463317 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
VAMP7-204ENST00000463317 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
VAMP7-204ENST00000463317 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
VAMP7-204ENST00000463317 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
VAMP7-204ENST00000463317 ZNF608Q9ULD9 1512 aaPredicted RBP12.09□□□□□ -0.47
VAMP7-204ENST00000463317 MSH5O43196 834 aa12.06□□□□□ -0.48
VAMP7-204ENST00000463317 CHD1O14646 1710 aa12.03□□□□□ -0.48
VAMP7-204ENST00000463317 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
VAMP7-204ENST00000463317 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
VAMP7-204ENST00000463317 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.5
VAMP7-204ENST00000463317 CFTRP13569 1480 aa11.95□□□□□ -0.5
VAMP7-204ENST00000463317 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
VAMP7-204ENST00000463317 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
VAMP7-204ENST00000463317 FBLN2P98095 1184 aa11.9□□□□□ -0.5
VAMP7-204ENST00000463317 FBXO41Q8TF61 875 aa11.89□□□□□ -0.51
VAMP7-204ENST00000463317 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
VAMP7-204ENST00000463317 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■■ 26.9
VAMP7-204ENST00000463317 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
VAMP7-204ENST00000463317 LMTK3Q96Q04 1460 aa11.84□□□□□ -0.51
VAMP7-204ENST00000463317 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
VAMP7-204ENST00000463317 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
VAMP7-204ENST00000463317 SOCS7O14512 581 aa11.8□□□□□ -0.52
VAMP7-204ENST00000463317 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
VAMP7-204ENST00000463317 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
VAMP7-204ENST00000463317 TARBP1Q13395 1621 aaKnown RBP11.78□□□□□ -0.52
VAMP7-204ENST00000463317 ILDR2Q71H61 639 aa11.73□□□□□ -0.53
VAMP7-204ENST00000463317 WIZO95785 1651 aa11.72□□□□□ -0.53
VAMP7-204ENST00000463317 PRDM2Q13029 1718 aa11.71□□□□□ -0.54
VAMP7-204ENST00000463317 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
VAMP7-204ENST00000463317 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
VAMP7-204ENST00000463317 ABCC8Q09428 1581 aa11.69□□□□□ -0.54
VAMP7-204ENST00000463317 KDM6BO15054 1643 aa11.68□□□□□ -0.54
VAMP7-204ENST00000463317 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
VAMP7-204ENST00000463317 SYNJ2O15056 1496 aa11.66□□□□□ -0.54
VAMP7-204ENST00000463317 DNMBPQ6XZF7 1577 aa11.66□□□□□ -0.54
VAMP7-204ENST00000463317 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
VAMP7-204ENST00000463317 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
VAMP7-204ENST00000463317 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
VAMP7-204ENST00000463317 FAM69CQ0P6D2 419 aa11.62□□□□□ -0.55
VAMP7-204ENST00000463317 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
VAMP7-204ENST00000463317 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
VAMP7-204ENST00000463317 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
VAMP7-204ENST00000463317 DISP3Q9P2K9 1392 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms