RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 CC2D2AQ9P2K1 1620 aa10.89□□□□□ -0.67
SREBF2-204ENST00000462539 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
SREBF2-204ENST00000462539 MAPKBP1O60336 1514 aa10.89□□□□□ -0.67
SREBF2-204ENST00000462539 CUL7Q14999 1698 aa10.89□□□□□ -0.67
SREBF2-204ENST00000462539 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
SREBF2-204ENST00000462539 IGF1RP08069 1367 aa10.87□□□□□ -0.67
SREBF2-204ENST00000462539 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
SREBF2-204ENST00000462539 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
SREBF2-204ENST00000462539 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
SREBF2-204ENST00000462539 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
SREBF2-204ENST00000462539 FYCO1Q9BQS8 1478 aa10.82□□□□□ -0.68
SREBF2-204ENST00000462539 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
SREBF2-204ENST00000462539 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
SREBF2-204ENST00000462539 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
SREBF2-204ENST00000462539 RAB3GAP2Q9H2M9 1393 aa10.81□□□□□ -0.68
SREBF2-204ENST00000462539 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
SREBF2-204ENST00000462539 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
SREBF2-204ENST00000462539 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.687e-7■■■■□ 24.8
SREBF2-204ENST00000462539 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
SREBF2-204ENST00000462539 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
SREBF2-204ENST00000462539 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
SREBF2-204ENST00000462539 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.68
SREBF2-204ENST00000462539 SAMD9Q5K651 1589 aa10.77□□□□□ -0.68
SREBF2-204ENST00000462539 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
SREBF2-204ENST00000462539 CASKIN1Q8WXD9 1431 aa10.76□□□□□ -0.69
SREBF2-204ENST00000462539 FHOD3Q2V2M9 1422 aa10.75□□□□□ -0.69
SREBF2-204ENST00000462539 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
SREBF2-204ENST00000462539 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
SREBF2-204ENST00000462539 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
SREBF2-204ENST00000462539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
SREBF2-204ENST00000462539 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
SREBF2-204ENST00000462539 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
SREBF2-204ENST00000462539 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
SREBF2-204ENST00000462539 ITGAEP38570 1179 aa10.7□□□□□ -0.7
SREBF2-204ENST00000462539 GCC2Q8IWJ2 1684 aa10.69□□□□□ -0.7
SREBF2-204ENST00000462539 NESP48681 1621 aa10.69□□□□□ -0.7
SREBF2-204ENST00000462539 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
SREBF2-204ENST00000462539 PBRM1Q86U86 1689 aa10.69□□□□□ -0.7
SREBF2-204ENST00000462539 EHBP1L1Q8N3D4 1523 aa10.68□□□□□ -0.7
SREBF2-204ENST00000462539 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
SREBF2-204ENST00000462539 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
SREBF2-204ENST00000462539 FGD6Q6ZV73 1430 aa10.67□□□□□ -0.7
SREBF2-204ENST00000462539 MYT1Q01538 1121 aa10.66□□□□□ -0.7
SREBF2-204ENST00000462539 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
SREBF2-204ENST00000462539 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
SREBF2-204ENST00000462539 ARHGEF11O15085 1522 aa10.64□□□□□ -0.71
SREBF2-204ENST00000462539 FAM50AQ14320 339 aaKnown RBP10.64□□□□□ -0.71
SREBF2-204ENST00000462539 TARBP1Q13395 1621 aaKnown RBP10.63□□□□□ -0.71
SREBF2-204ENST00000462539 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
SREBF2-204ENST00000462539 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
SREBF2-204ENST00000462539 HFM1A2PYH4 1435 aa10.62□□□□□ -0.71
SREBF2-204ENST00000462539 FOXD1Q16676 465 aa10.62□□□□□ -0.71
SREBF2-204ENST00000462539 TIMELESSQ9UNS1 1208 aa10.62□□□□□ -0.71
SREBF2-204ENST00000462539 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
SREBF2-204ENST00000462539 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
SREBF2-204ENST00000462539 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
SREBF2-204ENST00000462539 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
SREBF2-204ENST00000462539 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
SREBF2-204ENST00000462539 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
SREBF2-204ENST00000462539 MAGI3Q5TCQ9 1506 aa10.6□□□□□ -0.71
SREBF2-204ENST00000462539 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
SREBF2-204ENST00000462539 PTPRKQ15262 1439 aa10.59□□□□□ -0.71
SREBF2-204ENST00000462539 ADRA2BP18089 450 aa10.59□□□□□ -0.71
SREBF2-204ENST00000462539 SIN3AQ96ST3 1273 aa10.59□□□□□ -0.71
SREBF2-204ENST00000462539 TCOF1Q13428 1488 aaKnown RBP10.59□□□□□ -0.71
SREBF2-204ENST00000462539 KCNA4P22459 653 aa10.58□□□□□ -0.72
SREBF2-204ENST00000462539 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
SREBF2-204ENST00000462539 NAIPQ13075 1403 aa10.57□□□□□ -0.72
SREBF2-204ENST00000462539 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
SREBF2-204ENST00000462539 PPP1R15AO75807 674 aaPredicted RBP10.56□□□□□ -0.72
SREBF2-204ENST00000462539 WDR62O43379 1518 aa10.56□□□□□ -0.72
SREBF2-204ENST00000462539 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
SREBF2-204ENST00000462539 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
SREBF2-204ENST00000462539 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
SREBF2-204ENST00000462539 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
SREBF2-204ENST00000462539 KDM6BO15054 1643 aa10.54□□□□□ -0.72
SREBF2-204ENST00000462539 TONSLQ96HA7 1378 aa10.53□□□□□ -0.72
SREBF2-204ENST00000462539 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
SREBF2-204ENST00000462539 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.73
SREBF2-204ENST00000462539 CCER2I3L3R5 266 aa10.51□□□□□ -0.73
SREBF2-204ENST00000462539 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
SREBF2-204ENST00000462539 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
SREBF2-204ENST00000462539 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
SREBF2-204ENST00000462539 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
SREBF2-204ENST00000462539 CDK13Q14004 1512 aaKnown RBP10.48□□□□□ -0.73
SREBF2-204ENST00000462539 ADGBQ8N7X0 1667 aa10.48□□□□□ -0.73
SREBF2-204ENST00000462539 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
SREBF2-204ENST00000462539 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
SREBF2-204ENST00000462539 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
SREBF2-204ENST00000462539 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
SREBF2-204ENST00000462539 RAPGEF6Q8TEU7 1601 aa10.45□□□□□ -0.74
SREBF2-204ENST00000462539 MRC2Q9UBG0 1479 aa10.45□□□□□ -0.74
SREBF2-204ENST00000462539 ANP32CO43423 234 aa10.45□□□□□ -0.74
SREBF2-204ENST00000462539 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
SREBF2-204ENST00000462539 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
SREBF2-204ENST00000462539 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
SREBF2-204ENST00000462539 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
SREBF2-204ENST00000462539 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
SREBF2-204ENST00000462539 FKBP8Q14318 412 aa10.4□□□□□ -0.74
SREBF2-204ENST00000462539 DAPK1P53355 1430 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms