RNA–Protein interactions for RNA: ENST00000460750.5

KCNT1-203, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 1 (best)

Gene KCNT1, Length 4,738 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-203ENST00000460750 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.23■■□□□ 1.15
KCNT1-203ENST00000460750 SOGA1O94964 1423 aa22.23■■□□□ 1.15
KCNT1-203ENST00000460750 WIZO95785 1651 aa22.22■■□□□ 1.15
KCNT1-203ENST00000460750 PRKCSHP14314 528 aaPredicted RBP22.22■■□□□ 1.15
KCNT1-203ENST00000460750 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
KCNT1-203ENST00000460750 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
KCNT1-203ENST00000460750 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
KCNT1-203ENST00000460750 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
KCNT1-203ENST00000460750 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
KCNT1-203ENST00000460750 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
KCNT1-203ENST00000460750 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
KCNT1-203ENST00000460750 DDRGK1Q96HY6 314 aa22.11■■□□□ 1.13
KCNT1-203ENST00000460750 LAS1LQ9Y4W2 734 aaKnown RBP22.11■■□□□ 1.13
KCNT1-203ENST00000460750 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
KCNT1-203ENST00000460750 PPP4R2Q9NY27 417 aa22.07■■□□□ 1.12
KCNT1-203ENST00000460750 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
KCNT1-203ENST00000460750 UPF2Q9HAU5 1272 aaKnown RBP22.06■■□□□ 1.12
KCNT1-203ENST00000460750 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.11
KCNT1-203ENST00000460750 TRIM44Q96DX7 344 aaPredicted RBP22.01■■□□□ 1.11
KCNT1-203ENST00000460750 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
KCNT1-203ENST00000460750 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
KCNT1-203ENST00000460750 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
KCNT1-203ENST00000460750 HSP90AA1P07900 732 aaKnown RBP21.97■■□□□ 1.11
KCNT1-203ENST00000460750 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
KCNT1-203ENST00000460750 SLC24A1O60721 1099 aa21.94■■□□□ 1.1
KCNT1-203ENST00000460750 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
KCNT1-203ENST00000460750 CUX2O14529 1486 aa21.91■■□□□ 1.1
KCNT1-203ENST00000460750 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
KCNT1-203ENST00000460750 HIRIP3Q9BW71 556 aaPredicted RBP21.9■■□□□ 1.1
KCNT1-203ENST00000460750 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.1
KCNT1-203ENST00000460750 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
KCNT1-203ENST00000460750 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
KCNT1-203ENST00000460750 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
KCNT1-203ENST00000460750 BECN1Q14457 450 aa21.83■■□□□ 1.09
KCNT1-203ENST00000460750 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
KCNT1-203ENST00000460750 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
KCNT1-203ENST00000460750 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
KCNT1-203ENST00000460750 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.79■■□□□ 1.08
KCNT1-203ENST00000460750 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
KCNT1-203ENST00000460750 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
KCNT1-203ENST00000460750 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.08
KCNT1-203ENST00000460750 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
KCNT1-203ENST00000460750 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
KCNT1-203ENST00000460750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.07
KCNT1-203ENST00000460750 KDM2AQ9Y2K7 1162 aa21.72■■□□□ 1.07
KCNT1-203ENST00000460750 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
KCNT1-203ENST00000460750 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
KCNT1-203ENST00000460750 CDK11BP21127 795 aaKnown RBP21.71■■□□□ 1.07
KCNT1-203ENST00000460750 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
KCNT1-203ENST00000460750 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
KCNT1-203ENST00000460750 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
KCNT1-203ENST00000460750 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
KCNT1-203ENST00000460750 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
KCNT1-203ENST00000460750 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
KCNT1-203ENST00000460750 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
KCNT1-203ENST00000460750 L1TD1Q5T7N2 865 aaKnown RBP21.68■■□□□ 1.06
KCNT1-203ENST00000460750 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
KCNT1-203ENST00000460750 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
KCNT1-203ENST00000460750 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
KCNT1-203ENST00000460750 NCLP19338 710 aaKnown RBP21.65■■□□□ 1.06
KCNT1-203ENST00000460750 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
KCNT1-203ENST00000460750 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
KCNT1-203ENST00000460750 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
KCNT1-203ENST00000460750 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
KCNT1-203ENST00000460750 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
KCNT1-203ENST00000460750 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
KCNT1-203ENST00000460750 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
KCNT1-203ENST00000460750 PKNOX2Q96KN3 472 aa21.58■■□□□ 1.05
KCNT1-203ENST00000460750 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
KCNT1-203ENST00000460750 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
KCNT1-203ENST00000460750 USP35Q9P2H5 1018 aa21.57■■□□□ 1.04
KCNT1-203ENST00000460750 GOLGA6L22H0YM25 854 aa21.56■■□□□ 1.04
KCNT1-203ENST00000460750 DNTTIP2Q5QJE6 756 aaKnown RBP21.56■■□□□ 1.04
KCNT1-203ENST00000460750 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
KCNT1-203ENST00000460750 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
KCNT1-203ENST00000460750 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
KCNT1-203ENST00000460750 PTMAP06454 111 aaKnown RBP21.5■■□□□ 1.03
KCNT1-203ENST00000460750 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
KCNT1-203ENST00000460750 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
KCNT1-203ENST00000460750 AMER1Q5JTC6 1135 aaPredicted RBP21.45■■□□□ 1.02
KCNT1-203ENST00000460750 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
KCNT1-203ENST00000460750 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
KCNT1-203ENST00000460750 RGS3P49796 1198 aa21.43■■□□□ 1.02
KCNT1-203ENST00000460750 MSNP26038 577 aaKnown RBP21.43■■□□□ 1.02
KCNT1-203ENST00000460750 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
KCNT1-203ENST00000460750 GSE1Q14687 1217 aa21.42■■□□□ 1.02
KCNT1-203ENST00000460750 FMN1Q68DA7 1419 aa21.42■■□□□ 1.02
KCNT1-203ENST00000460750 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
KCNT1-203ENST00000460750 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
KCNT1-203ENST00000460750 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
KCNT1-203ENST00000460750 MYH16Q9H6N6 1097 aa21.37■■□□□ 1.01
KCNT1-203ENST00000460750 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
KCNT1-203ENST00000460750 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
KCNT1-203ENST00000460750 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
KCNT1-203ENST00000460750 RAB3GAP2Q9H2M9 1393 aa21.35■■□□□ 1.01
KCNT1-203ENST00000460750 IL27Q8NEV9 243 aa21.34■■□□□ 1.01
KCNT1-203ENST00000460750 ARID3AQ99856 593 aa21.33■■□□□ 1.01
KCNT1-203ENST00000460750 PODXL2Q9NZ53 605 aa21.33■■□□□ 1.01
KCNT1-203ENST00000460750 KNSTRNQ9Y448 316 aa21.33■■□□□ 1
KCNT1-203ENST00000460750 IGF1RP08069 1367 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms