RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 CHIC2Q9UKJ5 165 aa18.65■□□□□ 0.58
SMTN-213ENST00000460658 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
SMTN-213ENST00000460658 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
SMTN-213ENST00000460658 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
SMTN-213ENST00000460658 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
SMTN-213ENST00000460658 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
SMTN-213ENST00000460658 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
SMTN-213ENST00000460658 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
SMTN-213ENST00000460658 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
SMTN-213ENST00000460658 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
SMTN-213ENST00000460658 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
SMTN-213ENST00000460658 BECN1Q14457 450 aa18.53■□□□□ 0.56
SMTN-213ENST00000460658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.561e-7■□□□□ 10.9
SMTN-213ENST00000460658 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.56
SMTN-213ENST00000460658 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
SMTN-213ENST00000460658 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
SMTN-213ENST00000460658 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
SMTN-213ENST00000460658 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
SMTN-213ENST00000460658 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
SMTN-213ENST00000460658 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
SMTN-213ENST00000460658 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
SMTN-213ENST00000460658 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
SMTN-213ENST00000460658 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
SMTN-213ENST00000460658 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
SMTN-213ENST00000460658 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
SMTN-213ENST00000460658 KNSTRNQ9Y448 316 aa18.38■□□□□ 0.53
SMTN-213ENST00000460658 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
SMTN-213ENST00000460658 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
SMTN-213ENST00000460658 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
SMTN-213ENST00000460658 NBR1Q14596 966 aa18.34■□□□□ 0.53
SMTN-213ENST00000460658 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
SMTN-213ENST00000460658 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
SMTN-213ENST00000460658 MS4A1P11836 297 aa18.34■□□□□ 0.53
SMTN-213ENST00000460658 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
SMTN-213ENST00000460658 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
SMTN-213ENST00000460658 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
SMTN-213ENST00000460658 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
SMTN-213ENST00000460658 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.51
SMTN-213ENST00000460658 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
SMTN-213ENST00000460658 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
SMTN-213ENST00000460658 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
SMTN-213ENST00000460658 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
SMTN-213ENST00000460658 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
SMTN-213ENST00000460658 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
SMTN-213ENST00000460658 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
SMTN-213ENST00000460658 TRIM44Q96DX7 344 aaPredicted RBP18.23■□□□□ 0.51
SMTN-213ENST00000460658 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
SMTN-213ENST00000460658 CUX2O14529 1486 aa18.22■□□□□ 0.51
SMTN-213ENST00000460658 SOGA1O94964 1423 aa18.19■□□□□ 0.5
SMTN-213ENST00000460658 TMF1P82094 1093 aa18.19■□□□□ 0.5
SMTN-213ENST00000460658 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
SMTN-213ENST00000460658 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
SMTN-213ENST00000460658 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
SMTN-213ENST00000460658 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
SMTN-213ENST00000460658 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
SMTN-213ENST00000460658 SIN3AQ96ST3 1273 aa18.17■□□□□ 0.5
SMTN-213ENST00000460658 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
SMTN-213ENST00000460658 KANK1Q14678 1352 aa18.16■□□□□ 0.5
SMTN-213ENST00000460658 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
SMTN-213ENST00000460658 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
SMTN-213ENST00000460658 NOP58Q9Y2X3 529 aaKnown RBP18.14■□□□□ 0.49
SMTN-213ENST00000460658 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
SMTN-213ENST00000460658 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
SMTN-213ENST00000460658 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
SMTN-213ENST00000460658 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
SMTN-213ENST00000460658 CARMIL2Q6F5E8 1435 aa18.07■□□□□ 0.48
SMTN-213ENST00000460658 RALBP1Q15311 655 aa18.06■□□□□ 0.48
SMTN-213ENST00000460658 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
SMTN-213ENST00000460658 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
SMTN-213ENST00000460658 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
SMTN-213ENST00000460658 POGKQ9P215 609 aa18.02■□□□□ 0.48
SMTN-213ENST00000460658 ZRSR1Q15695 479 aaKnown RBP18.02■□□□□ 0.48
SMTN-213ENST00000460658 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
SMTN-213ENST00000460658 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
SMTN-213ENST00000460658 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
SMTN-213ENST00000460658 DCAF11Q8TEB1 546 aa18.01■□□□□ 0.47
SMTN-213ENST00000460658 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
SMTN-213ENST00000460658 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
SMTN-213ENST00000460658 PTMSP20962 102 aa18■□□□□ 0.47
SMTN-213ENST00000460658 ARXQ96QS3 562 aa18■□□□□ 0.47
SMTN-213ENST00000460658 ANKRD30AQ9BXX3 1397 aa17.99■□□□□ 0.47
SMTN-213ENST00000460658 PTMAP06454 111 aaKnown RBP17.98■□□□□ 0.47
SMTN-213ENST00000460658 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
SMTN-213ENST00000460658 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
SMTN-213ENST00000460658 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
SMTN-213ENST00000460658 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
SMTN-213ENST00000460658 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
SMTN-213ENST00000460658 CALD1Q05682 793 aaKnown RBP17.95■□□□□ 0.46
SMTN-213ENST00000460658 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
SMTN-213ENST00000460658 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
SMTN-213ENST00000460658 RGS3P49796 1198 aa17.94■□□□□ 0.46
SMTN-213ENST00000460658 HSCBQ8IWL3 235 aa17.94■□□□□ 0.46
SMTN-213ENST00000460658 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
SMTN-213ENST00000460658 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
SMTN-213ENST00000460658 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
SMTN-213ENST00000460658 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SMTN-213ENST00000460658 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
SMTN-213ENST00000460658 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
SMTN-213ENST00000460658 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
SMTN-213ENST00000460658 PKD2Q13563 968 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms