RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 NISCHQ9Y2I1 1504 aa23.61■■□□□ 1.37
SMTN-213ENST00000460658 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
SMTN-213ENST00000460658 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
SMTN-213ENST00000460658 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
SMTN-213ENST00000460658 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
SMTN-213ENST00000460658 APLP2Q06481 763 aa21.89■■□□□ 1.09
SMTN-213ENST00000460658 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
SMTN-213ENST00000460658 MYT1Q01538 1121 aa21.65■■□□□ 1.06
SMTN-213ENST00000460658 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
SMTN-213ENST00000460658 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
SMTN-213ENST00000460658 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
SMTN-213ENST00000460658 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
SMTN-213ENST00000460658 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
SMTN-213ENST00000460658 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
SMTN-213ENST00000460658 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
SMTN-213ENST00000460658 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
SMTN-213ENST00000460658 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
SMTN-213ENST00000460658 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
SMTN-213ENST00000460658 NEFLP07196 543 aa20.82■□□□□ 0.92
SMTN-213ENST00000460658 HRCP23327 699 aa20.7■□□□□ 0.9
SMTN-213ENST00000460658 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
SMTN-213ENST00000460658 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
SMTN-213ENST00000460658 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.88
SMTN-213ENST00000460658 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
SMTN-213ENST00000460658 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
SMTN-213ENST00000460658 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
SMTN-213ENST00000460658 DAXXQ9UER7 740 aaPredicted RBP20.1■□□□□ 0.81
SMTN-213ENST00000460658 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
SMTN-213ENST00000460658 ITGAEP38570 1179 aa20.04■□□□□ 0.8
SMTN-213ENST00000460658 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
SMTN-213ENST00000460658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
SMTN-213ENST00000460658 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.76
SMTN-213ENST00000460658 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
SMTN-213ENST00000460658 RTL5Q5HYW3 569 aaPredicted RBP19.8■□□□□ 0.76
SMTN-213ENST00000460658 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
SMTN-213ENST00000460658 ABCC9O60706 1549 aa19.73■□□□□ 0.75
SMTN-213ENST00000460658 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
SMTN-213ENST00000460658 CLSPNQ9HAW4 1339 aa19.68■□□□□ 0.74
SMTN-213ENST00000460658 ANP32CO43423 234 aa19.67■□□□□ 0.74
SMTN-213ENST00000460658 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
SMTN-213ENST00000460658 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
SMTN-213ENST00000460658 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
SMTN-213ENST00000460658 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
SMTN-213ENST00000460658 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
SMTN-213ENST00000460658 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.72
SMTN-213ENST00000460658 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.713e-10■■■■□ 19.6
SMTN-213ENST00000460658 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
SMTN-213ENST00000460658 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
SMTN-213ENST00000460658 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
SMTN-213ENST00000460658 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
SMTN-213ENST00000460658 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
SMTN-213ENST00000460658 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
SMTN-213ENST00000460658 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
SMTN-213ENST00000460658 SCRIBQ14160 1630 aa19.28■□□□□ 0.68
SMTN-213ENST00000460658 GLIPR1L2Q4G1C9 344 aa19.26■□□□□ 0.67
SMTN-213ENST00000460658 EEA1Q15075 1411 aa19.23■□□□□ 0.67
SMTN-213ENST00000460658 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
SMTN-213ENST00000460658 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
SMTN-213ENST00000460658 BCANQ96GW7 911 aa19.21■□□□□ 0.67
SMTN-213ENST00000460658 NEFMP07197 916 aa19.21■□□□□ 0.67
SMTN-213ENST00000460658 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
SMTN-213ENST00000460658 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.66
SMTN-213ENST00000460658 FBLN2P98095 1184 aa19.07■□□□□ 0.64
SMTN-213ENST00000460658 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
SMTN-213ENST00000460658 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
SMTN-213ENST00000460658 CLIP1P30622 1438 aa18.99■□□□□ 0.63
SMTN-213ENST00000460658 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
SMTN-213ENST00000460658 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
SMTN-213ENST00000460658 FKBP8Q14318 412 aa18.95■□□□□ 0.62
SMTN-213ENST00000460658 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
SMTN-213ENST00000460658 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMTN-213ENST00000460658 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
SMTN-213ENST00000460658 UPF2Q9HAU5 1272 aaKnown RBP18.92■□□□□ 0.62
SMTN-213ENST00000460658 NACADO15069 1562 aa18.91■□□□□ 0.62
SMTN-213ENST00000460658 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
SMTN-213ENST00000460658 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
SMTN-213ENST00000460658 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
SMTN-213ENST00000460658 ANP32BQ92688 251 aaKnown RBP18.85■□□□□ 0.61
SMTN-213ENST00000460658 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
SMTN-213ENST00000460658 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
SMTN-213ENST00000460658 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
SMTN-213ENST00000460658 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
SMTN-213ENST00000460658 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
SMTN-213ENST00000460658 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
SMTN-213ENST00000460658 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
SMTN-213ENST00000460658 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMTN-213ENST00000460658 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
SMTN-213ENST00000460658 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
SMTN-213ENST00000460658 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.59
SMTN-213ENST00000460658 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMTN-213ENST00000460658 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
SMTN-213ENST00000460658 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
SMTN-213ENST00000460658 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
SMTN-213ENST00000460658 NPM2Q86SE8 214 aaKnown RBP18.73■□□□□ 0.59
SMTN-213ENST00000460658 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMTN-213ENST00000460658 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
SMTN-213ENST00000460658 HSP90AA1P07900 732 aaKnown RBP18.7■□□□□ 0.58
SMTN-213ENST00000460658 MIER1Q8N108 512 aa18.68■□□□□ 0.58
SMTN-213ENST00000460658 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
SMTN-213ENST00000460658 SLC24A1O60721 1099 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms