RNA–Protein interactions for RNA: ENST00000460214.5

LRP8-206, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-206ENST00000460214 SOGA1O94964 1423 aa13.91□□□□□ -0.18
LRP8-206ENST00000460214 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
LRP8-206ENST00000460214 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
LRP8-206ENST00000460214 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
LRP8-206ENST00000460214 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
LRP8-206ENST00000460214 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
LRP8-206ENST00000460214 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.197e-7■■■■□ 26.7
LRP8-206ENST00000460214 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
LRP8-206ENST00000460214 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
LRP8-206ENST00000460214 CHD1O14646 1710 aa13.84□□□□□ -0.19
LRP8-206ENST00000460214 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
LRP8-206ENST00000460214 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
LRP8-206ENST00000460214 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
LRP8-206ENST00000460214 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
LRP8-206ENST00000460214 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
LRP8-206ENST00000460214 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
LRP8-206ENST00000460214 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
LRP8-206ENST00000460214 CAPN15O75808 1086 aa13.76□□□□□ -0.21
LRP8-206ENST00000460214 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
LRP8-206ENST00000460214 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
LRP8-206ENST00000460214 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
LRP8-206ENST00000460214 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
LRP8-206ENST00000460214 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
LRP8-206ENST00000460214 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
LRP8-206ENST00000460214 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
LRP8-206ENST00000460214 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
LRP8-206ENST00000460214 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
LRP8-206ENST00000460214 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
LRP8-206ENST00000460214 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
LRP8-206ENST00000460214 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
LRP8-206ENST00000460214 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
LRP8-206ENST00000460214 CUL7Q14999 1698 aa13.61□□□□□ -0.23
LRP8-206ENST00000460214 NUP160Q12769 1436 aa13.61□□□□□ -0.23
LRP8-206ENST00000460214 FBLN2P98095 1184 aa13.6□□□□□ -0.23
LRP8-206ENST00000460214 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
LRP8-206ENST00000460214 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
LRP8-206ENST00000460214 DSG3P32926 999 aa13.57□□□□□ -0.24
LRP8-206ENST00000460214 POLA2Q14181 598 aa13.57□□□□□ -0.24
LRP8-206ENST00000460214 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
LRP8-206ENST00000460214 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
LRP8-206ENST00000460214 IGF1RP08069 1367 aa13.53□□□□□ -0.24
LRP8-206ENST00000460214 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
LRP8-206ENST00000460214 ABCB7O75027 752 aa13.49□□□□□ -0.25
LRP8-206ENST00000460214 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
LRP8-206ENST00000460214 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
LRP8-206ENST00000460214 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
LRP8-206ENST00000460214 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
LRP8-206ENST00000460214 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
LRP8-206ENST00000460214 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
LRP8-206ENST00000460214 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
LRP8-206ENST00000460214 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
LRP8-206ENST00000460214 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
LRP8-206ENST00000460214 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
LRP8-206ENST00000460214 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
LRP8-206ENST00000460214 CTTNBP2Q8WZ74 1663 aa13.35□□□□□ -0.27
LRP8-206ENST00000460214 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
LRP8-206ENST00000460214 EEA1Q15075 1411 aa13.34□□□□□ -0.27
LRP8-206ENST00000460214 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
LRP8-206ENST00000460214 DISP1Q96F81 1524 aa13.27□□□□□ -0.29
LRP8-206ENST00000460214 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
LRP8-206ENST00000460214 ADCY10Q96PN6 1610 aa13.26□□□□□ -0.29
LRP8-206ENST00000460214 KIAA0556O60303 1618 aa13.25□□□□□ -0.29
LRP8-206ENST00000460214 KIF21BO75037 1637 aa13.24□□□□□ -0.29
LRP8-206ENST00000460214 MAPKBP1O60336 1514 aa13.22□□□□□ -0.29
LRP8-206ENST00000460214 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
LRP8-206ENST00000460214 FKBP8Q14318 412 aa13.2□□□□□ -0.3
LRP8-206ENST00000460214 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
LRP8-206ENST00000460214 GOLGA3Q08378 1498 aa13.19□□□□□ -0.3
LRP8-206ENST00000460214 PTPRGP23470 1445 aa13.19□□□□□ -0.3
LRP8-206ENST00000460214 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
LRP8-206ENST00000460214 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
LRP8-206ENST00000460214 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
LRP8-206ENST00000460214 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
LRP8-206ENST00000460214 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
LRP8-206ENST00000460214 DIP2BQ9P265 1576 aa13.12□□□□□ -0.31
LRP8-206ENST00000460214 ABCA8O94911 1581 aa13.11□□□□□ -0.31
LRP8-206ENST00000460214 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
LRP8-206ENST00000460214 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
LRP8-206ENST00000460214 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
LRP8-206ENST00000460214 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.31
LRP8-206ENST00000460214 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
LRP8-206ENST00000460214 PLB1Q6P1J6 1458 aa13.06□□□□□ -0.32
LRP8-206ENST00000460214 GLI2P10070 1586 aa13.05□□□□□ -0.32
LRP8-206ENST00000460214 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
LRP8-206ENST00000460214 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
LRP8-206ENST00000460214 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
LRP8-206ENST00000460214 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
LRP8-206ENST00000460214 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
LRP8-206ENST00000460214 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.33
LRP8-206ENST00000460214 PROM2Q8N271 834 aa13.01□□□□□ -0.33
LRP8-206ENST00000460214 MAP3K4Q9Y6R4 1608 aa13□□□□□ -0.33
LRP8-206ENST00000460214 WDR7Q9Y4E6 1490 aa12.99□□□□□ -0.33
LRP8-206ENST00000460214 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
LRP8-206ENST00000460214 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
LRP8-206ENST00000460214 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
LRP8-206ENST00000460214 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
LRP8-206ENST00000460214 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
LRP8-206ENST00000460214 FAM69CQ0P6D2 419 aa12.96□□□□□ -0.33
LRP8-206ENST00000460214 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
LRP8-206ENST00000460214 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms