RNA–Protein interactions for RNA: ENST00000457749.6

ZNF28-204, Transcript of zinc finger protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF28, Length 4,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-204ENST00000457749 CHD1O14646 1710 aa7.52□□□□□ -1.21
ZNF28-204ENST00000457749 GRIN2AQ12879 1464 aa7.52□□□□□ -1.21
ZNF28-204ENST00000457749 FAM69CQ0P6D2 419 aa7.5□□□□□ -1.21
ZNF28-204ENST00000457749 PLPPR3Q6T4P5 718 aa7.48□□□□□ -1.21
ZNF28-204ENST00000457749 MYT1LQ9UL68 1186 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 RIMBP3CA6NJZ7 1639 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 RIMBP3BA6NNM3 1639 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 RIMBP3Q9UFD9 1639 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 PTPRGP23470 1445 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 ARAP1Q96P48 1450 aa7.47□□□□□ -1.21
ZNF28-204ENST00000457749 ERCC6L2Q5T890 1561 aa7.46□□□□□ -1.21
ZNF28-204ENST00000457749 BIVM-ERCC5R4GMW8 1640 aa7.46□□□□□ -1.22
ZNF28-204ENST00000457749 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
ZNF28-204ENST00000457749 RAPGEF2Q9Y4G8 1499 aa7.45□□□□□ -1.22
ZNF28-204ENST00000457749 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
ZNF28-204ENST00000457749 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
ZNF28-204ENST00000457749 PPARGC1BQ86YN6 1023 aaKnown RBP7.43□□□□□ -1.22
ZNF28-204ENST00000457749 ADAMTS12P58397 1594 aa7.43□□□□□ -1.22
ZNF28-204ENST00000457749 ERICH3Q5RHP9 1530 aa7.43□□□□□ -1.22
ZNF28-204ENST00000457749 CEP170Q5SW79 1584 aa7.43□□□□□ -1.22
ZNF28-204ENST00000457749 NUP160Q12769 1436 aa7.41□□□□□ -1.22
ZNF28-204ENST00000457749 APLP2Q06481 763 aa7.4□□□□□ -1.22
ZNF28-204ENST00000457749 KIAA0586Q9BVV6 1533 aa7.4□□□□□ -1.22
ZNF28-204ENST00000457749 AEBP2Q6ZN18 517 aaPredicted RBP7.4□□□□□ -1.23
ZNF28-204ENST00000457749 FHOD3Q2V2M9 1422 aa7.39□□□□□ -1.23
ZNF28-204ENST00000457749 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
ZNF28-204ENST00000457749 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
ZNF28-204ENST00000457749 TNIKQ9UKE5 1360 aa7.38□□□□□ -1.23
ZNF28-204ENST00000457749 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
ZNF28-204ENST00000457749 CLASP1Q7Z460 1538 aa7.36□□□□□ -1.23
ZNF28-204ENST00000457749 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
ZNF28-204ENST00000457749 ARID4BQ4LE39 1312 aaPredicted RBP7.34□□□□□ -1.23
ZNF28-204ENST00000457749 IQGAP2Q13576 1575 aa7.34□□□□□ -1.23
ZNF28-204ENST00000457749 MLECQ14165 292 aa7.33□□□□□ -1.24
ZNF28-204ENST00000457749 PRXQ9BXM0 1461 aa7.33□□□□□ -1.24
ZNF28-204ENST00000457749 CUL7Q14999 1698 aa7.33□□□□□ -1.24
ZNF28-204ENST00000457749 UACAQ9BZF9 1416 aa7.32□□□□□ -1.24
ZNF28-204ENST00000457749 EEA1Q15075 1411 aa7.32□□□□□ -1.24
ZNF28-204ENST00000457749 GOLGA3Q08378 1498 aa7.31□□□□□ -1.24
ZNF28-204ENST00000457749 RAPGEF3O95398 923 aa7.3□□□□□ -1.24
ZNF28-204ENST00000457749 CDK11AQ9UQ88 783 aaPredicted RBP7.3□□□□□ -1.24
ZNF28-204ENST00000457749 ASXL2Q76L83 1435 aa7.3□□□□□ -1.24
ZNF28-204ENST00000457749 CLIP1P30622 1438 aa7.29□□□□□ -1.24
ZNF28-204ENST00000457749 DISP1Q96F81 1524 aa7.29□□□□□ -1.24
ZNF28-204ENST00000457749 ITGAEP38570 1179 aa7.28□□□□□ -1.24
ZNF28-204ENST00000457749 TSPOAP1O95153 1857 aa7.27□□□□□ -1.25
ZNF28-204ENST00000457749 PCGF6Q9BYE7 350 aa7.25□□□□□ -1.25
ZNF28-204ENST00000457749 ABCC2Q92887 1545 aa7.24□□□□□ -1.25
ZNF28-204ENST00000457749 CD109Q6YHK3 1445 aa7.24□□□□□ -1.25
ZNF28-204ENST00000457749 MTUS2Q5JR59 1369 aa7.23□□□□□ -1.25
ZNF28-204ENST00000457749 KIAA0556O60303 1618 aa7.23□□□□□ -1.25
ZNF28-204ENST00000457749 CEP162Q5TB80 1403 aa7.23□□□□□ -1.25
ZNF28-204ENST00000457749 ADCY10Q96PN6 1610 aa7.22□□□□□ -1.25
ZNF28-204ENST00000457749 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
ZNF28-204ENST00000457749 UGGT2Q9NYU1 1516 aa7.22□□□□□ -1.25
ZNF28-204ENST00000457749 AFAP1Q8N556 730 aa7.22□□□□□ -1.25
ZNF28-204ENST00000457749 FAM50AQ14320 339 aaKnown RBP7.21□□□□□ -1.25
ZNF28-204ENST00000457749 CFDP1Q9UEE9 299 aaPredicted RBP7.21□□□□□ -1.25
ZNF28-204ENST00000457749 ATP10BO94823 1461 aa7.21□□□□□ -1.26
ZNF28-204ENST00000457749 SENP3Q9H4L4 574 aaPredicted RBP7.21□□□□□ -1.26
ZNF28-204ENST00000457749 ARHGAP35Q9NRY4 1499 aa7.21□□□□□ -1.26
ZNF28-204ENST00000457749 HNRNPMP52272 730 aaKnown RBP eCLIP7.21□□□□□ -1.26
ZNF28-204ENST00000457749 SHROOM2Q13796 1616 aa7.2□□□□□ -1.26
ZNF28-204ENST00000457749 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
ZNF28-204ENST00000457749 ABCC10Q5T3U5 1492 aa7.2□□□□□ -1.26
ZNF28-204ENST00000457749 FMN1Q68DA7 1419 aa7.2□□□□□ -1.26
ZNF28-204ENST00000457749 EFCAB2Q5VUJ9 269 aa7.2□□□□□ -1.26
ZNF28-204ENST00000457749 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
ZNF28-204ENST00000457749 WDR7Q9Y4E6 1490 aa7.19□□□□□ -1.26
ZNF28-204ENST00000457749 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
ZNF28-204ENST00000457749 KANK4Q5T7N3 995 aaPredicted RBP7.18□□□□□ -1.26
ZNF28-204ENST00000457749 ZNF644Q9H582 1327 aaPredicted RBP7.18□□□□□ -1.26
ZNF28-204ENST00000457749 NUP153P49790 1475 aaKnown RBP7.17□□□□□ -1.26
ZNF28-204ENST00000457749 GGT6Q6P531 493 aa7.17□□□□□ -1.26
ZNF28-204ENST00000457749 KIF21BO75037 1637 aa7.16□□□□□ -1.26
ZNF28-204ENST00000457749 EPRSP07814 1512 aaKnown RBP7.16□□□□□ -1.26
ZNF28-204ENST00000457749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.16□□□□□ -1.26
ZNF28-204ENST00000457749 CCNB3Q8WWL7 1395 aa7.15□□□□□ -1.26
ZNF28-204ENST00000457749 KDM5BQ9UGL1 1544 aa7.15□□□□□ -1.27
ZNF28-204ENST00000457749 CEBPAP49715 358 aaPredicted RBP7.14□□□□□ -1.27
ZNF28-204ENST00000457749 ZCCHC11Q5TAX3 1644 aaKnown RBP7.14□□□□□ -1.27
ZNF28-204ENST00000457749 COL17A1Q9UMD9 1497 aaPredicted RBP7.14□□□□□ -1.27
ZNF28-204ENST00000457749 SCAPERQ9BY12 1400 aa7.13□□□□□ -1.27
ZNF28-204ENST00000457749 RAPGEF6Q8TEU7 1601 aa7.13□□□□□ -1.27
ZNF28-204ENST00000457749 KDM6BO15054 1643 aa7.13□□□□□ -1.27
ZNF28-204ENST00000457749 TSPY4P0CV99 314 aa7.12□□□□□ -1.27
ZNF28-204ENST00000457749 TSPY10P0CW01 314 aa7.12□□□□□ -1.27
ZNF28-204ENST00000457749 DIP2BQ9P265 1576 aa7.12□□□□□ -1.27
ZNF28-204ENST00000457749 UHRF1BP1LA0JNW5 1464 aa7.12□□□□□ -1.27
ZNF28-204ENST00000457749 KDM4FA0A1W2PPD8 638 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 ABCA8O94911 1581 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 FANCAO15360 1455 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 HSPA2P54652 639 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 SPAG9O60271 1321 aaKnown RBP7.11□□□□□ -1.27
ZNF28-204ENST00000457749 MAPKBP1O60336 1514 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 ARHGAP5Q13017 1502 aa7.11□□□□□ -1.27
ZNF28-204ENST00000457749 EFCAB5A4FU69 1503 aa7.1□□□□□ -1.27
ZNF28-204ENST00000457749 TEX14Q8IWB6 1497 aa7.1□□□□□ -1.27
ZNF28-204ENST00000457749 TRIM26Q12899 539 aaPredicted RBP7.1□□□□□ -1.27
ZNF28-204ENST00000457749 RRP7BPQ9NSQ0 103 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms