RNA–Protein interactions for RNA: ENST00000457177.5

ZNF550-205, Transcript of zinc finger protein 550, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF550, Length 3,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-205ENST00000457177 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
ZNF550-205ENST00000457177 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
ZNF550-205ENST00000457177 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
ZNF550-205ENST00000457177 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
ZNF550-205ENST00000457177 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
ZNF550-205ENST00000457177 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
ZNF550-205ENST00000457177 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
ZNF550-205ENST00000457177 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
ZNF550-205ENST00000457177 CFTRP13569 1480 aa16.82■□□□□ 0.28
ZNF550-205ENST00000457177 FKBP8Q14318 412 aa16.82■□□□□ 0.28
ZNF550-205ENST00000457177 NESP48681 1621 aa16.82■□□□□ 0.28
ZNF550-205ENST00000457177 FOXD1Q16676 465 aa16.81■□□□□ 0.28
ZNF550-205ENST00000457177 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
ZNF550-205ENST00000457177 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
ZNF550-205ENST00000457177 FBLN2P98095 1184 aa16.78■□□□□ 0.28
ZNF550-205ENST00000457177 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
ZNF550-205ENST00000457177 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
ZNF550-205ENST00000457177 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
ZNF550-205ENST00000457177 ANP32CO43423 234 aa16.74■□□□□ 0.27
ZNF550-205ENST00000457177 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
ZNF550-205ENST00000457177 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
ZNF550-205ENST00000457177 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
ZNF550-205ENST00000457177 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
ZNF550-205ENST00000457177 NEFLP07196 543 aa16.71■□□□□ 0.26
ZNF550-205ENST00000457177 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.26
ZNF550-205ENST00000457177 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
ZNF550-205ENST00000457177 LRRC9Q6ZRR7 1453 aa16.66■□□□□ 0.26
ZNF550-205ENST00000457177 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
ZNF550-205ENST00000457177 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.26
ZNF550-205ENST00000457177 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
ZNF550-205ENST00000457177 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
ZNF550-205ENST00000457177 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
ZNF550-205ENST00000457177 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
ZNF550-205ENST00000457177 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
ZNF550-205ENST00000457177 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
ZNF550-205ENST00000457177 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
ZNF550-205ENST00000457177 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
ZNF550-205ENST00000457177 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
ZNF550-205ENST00000457177 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
ZNF550-205ENST00000457177 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.23
ZNF550-205ENST00000457177 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
ZNF550-205ENST00000457177 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
ZNF550-205ENST00000457177 PTPRKQ15262 1439 aa16.49■□□□□ 0.23
ZNF550-205ENST00000457177 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
ZNF550-205ENST00000457177 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
ZNF550-205ENST00000457177 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
ZNF550-205ENST00000457177 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
ZNF550-205ENST00000457177 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
ZNF550-205ENST00000457177 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
ZNF550-205ENST00000457177 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
ZNF550-205ENST00000457177 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
ZNF550-205ENST00000457177 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
ZNF550-205ENST00000457177 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
ZNF550-205ENST00000457177 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
ZNF550-205ENST00000457177 EIF4G2P78344 907 aaKnown RBP eCLIP16.43■□□□□ 0.22
ZNF550-205ENST00000457177 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
ZNF550-205ENST00000457177 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
ZNF550-205ENST00000457177 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
ZNF550-205ENST00000457177 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
ZNF550-205ENST00000457177 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
ZNF550-205ENST00000457177 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
ZNF550-205ENST00000457177 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
ZNF550-205ENST00000457177 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
ZNF550-205ENST00000457177 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
ZNF550-205ENST00000457177 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
ZNF550-205ENST00000457177 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
ZNF550-205ENST00000457177 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
ZNF550-205ENST00000457177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.2
ZNF550-205ENST00000457177 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
ZNF550-205ENST00000457177 NAIPQ13075 1403 aa16.32■□□□□ 0.2
ZNF550-205ENST00000457177 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
ZNF550-205ENST00000457177 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
ZNF550-205ENST00000457177 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
ZNF550-205ENST00000457177 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
ZNF550-205ENST00000457177 CDK13Q14004 1512 aaKnown RBP16.31■□□□□ 0.2
ZNF550-205ENST00000457177 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
ZNF550-205ENST00000457177 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
ZNF550-205ENST00000457177 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
ZNF550-205ENST00000457177 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
ZNF550-205ENST00000457177 PKD2Q13563 968 aa16.27■□□□□ 0.19
ZNF550-205ENST00000457177 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
ZNF550-205ENST00000457177 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
ZNF550-205ENST00000457177 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
ZNF550-205ENST00000457177 MAP3K1Q13233 1512 aa16.21■□□□□ 0.18
ZNF550-205ENST00000457177 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
ZNF550-205ENST00000457177 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
ZNF550-205ENST00000457177 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
ZNF550-205ENST00000457177 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
ZNF550-205ENST00000457177 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
ZNF550-205ENST00000457177 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
ZNF550-205ENST00000457177 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
ZNF550-205ENST00000457177 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
ZNF550-205ENST00000457177 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
ZNF550-205ENST00000457177 TSPY4P0CV99 314 aa16.15■□□□□ 0.18
ZNF550-205ENST00000457177 TSPY10P0CW01 314 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms