RNA–Protein interactions for RNA: ENST00000455394.5

KIF3C-204, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-204ENST00000455394 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
KIF3C-204ENST00000455394 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
KIF3C-204ENST00000455394 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
KIF3C-204ENST00000455394 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
KIF3C-204ENST00000455394 KANK1Q14678 1352 aa20.43■□□□□ 0.86
KIF3C-204ENST00000455394 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
KIF3C-204ENST00000455394 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
KIF3C-204ENST00000455394 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
KIF3C-204ENST00000455394 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
KIF3C-204ENST00000455394 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
KIF3C-204ENST00000455394 MLECQ14165 292 aa20.33■□□□□ 0.84
KIF3C-204ENST00000455394 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
KIF3C-204ENST00000455394 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
KIF3C-204ENST00000455394 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
KIF3C-204ENST00000455394 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
KIF3C-204ENST00000455394 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
KIF3C-204ENST00000455394 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
KIF3C-204ENST00000455394 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
KIF3C-204ENST00000455394 PTPRGP23470 1445 aa20.24■□□□□ 0.83
KIF3C-204ENST00000455394 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
KIF3C-204ENST00000455394 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
KIF3C-204ENST00000455394 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
KIF3C-204ENST00000455394 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
KIF3C-204ENST00000455394 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
KIF3C-204ENST00000455394 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
KIF3C-204ENST00000455394 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
KIF3C-204ENST00000455394 WIZO95785 1651 aa20.14■□□□□ 0.81
KIF3C-204ENST00000455394 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
KIF3C-204ENST00000455394 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
KIF3C-204ENST00000455394 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
KIF3C-204ENST00000455394 A0A0G2JS52 829 aa20.1■□□□□ 0.81
KIF3C-204ENST00000455394 RAPGEF2Q9Y4G8 1499 aa20.09■□□□□ 0.81
KIF3C-204ENST00000455394 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
KIF3C-204ENST00000455394 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
KIF3C-204ENST00000455394 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
KIF3C-204ENST00000455394 GGT6Q6P531 493 aa20.03■□□□□ 0.8
KIF3C-204ENST00000455394 HRCP23327 699 aa20.03■□□□□ 0.8
KIF3C-204ENST00000455394 FOXD1Q16676 465 aa20.03■□□□□ 0.8
KIF3C-204ENST00000455394 TONSLQ96HA7 1378 aa20■□□□□ 0.79
KIF3C-204ENST00000455394 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
KIF3C-204ENST00000455394 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
KIF3C-204ENST00000455394 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
KIF3C-204ENST00000455394 POGKQ9P215 609 aa19.98■□□□□ 0.79
KIF3C-204ENST00000455394 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
KIF3C-204ENST00000455394 CFTRP13569 1480 aa19.96■□□□□ 0.79
KIF3C-204ENST00000455394 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
KIF3C-204ENST00000455394 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
KIF3C-204ENST00000455394 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
KIF3C-204ENST00000455394 POGZQ7Z3K3 1410 aa19.92■□□□□ 0.78
KIF3C-204ENST00000455394 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.78
KIF3C-204ENST00000455394 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
KIF3C-204ENST00000455394 NESP48681 1621 aa19.9■□□□□ 0.78
KIF3C-204ENST00000455394 RRP7BPQ9NSQ0 103 aa19.89■□□□□ 0.78
KIF3C-204ENST00000455394 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
KIF3C-204ENST00000455394 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
KIF3C-204ENST00000455394 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
KIF3C-204ENST00000455394 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
KIF3C-204ENST00000455394 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
KIF3C-204ENST00000455394 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
KIF3C-204ENST00000455394 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
KIF3C-204ENST00000455394 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
KIF3C-204ENST00000455394 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
KIF3C-204ENST00000455394 KIF3BO15066 747 aa19.78■□□□□ 0.76
KIF3C-204ENST00000455394 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
KIF3C-204ENST00000455394 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
KIF3C-204ENST00000455394 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
KIF3C-204ENST00000455394 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
KIF3C-204ENST00000455394 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
KIF3C-204ENST00000455394 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
KIF3C-204ENST00000455394 ANP32CO43423 234 aa19.72■□□□□ 0.75
KIF3C-204ENST00000455394 SYNJ2O15056 1496 aa19.72■□□□□ 0.75
KIF3C-204ENST00000455394 CANXP27824 592 aaKnown RBP19.71■□□□□ 0.75
KIF3C-204ENST00000455394 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
KIF3C-204ENST00000455394 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
KIF3C-204ENST00000455394 CCDC9Q9Y3X0 531 aaKnown RBP19.7■□□□□ 0.74
KIF3C-204ENST00000455394 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
KIF3C-204ENST00000455394 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
KIF3C-204ENST00000455394 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
KIF3C-204ENST00000455394 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
KIF3C-204ENST00000455394 NPHP1O15259 732 aa19.65■□□□□ 0.74
KIF3C-204ENST00000455394 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.74
KIF3C-204ENST00000455394 CFAP53Q96M91 514 aa19.64■□□□□ 0.73
KIF3C-204ENST00000455394 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
KIF3C-204ENST00000455394 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
KIF3C-204ENST00000455394 GLIPR1L2Q4G1C9 344 aa19.58■□□□□ 0.73
KIF3C-204ENST00000455394 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
KIF3C-204ENST00000455394 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.72
KIF3C-204ENST00000455394 IGF1RP08069 1367 aa19.55■□□□□ 0.72
KIF3C-204ENST00000455394 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
KIF3C-204ENST00000455394 CSB-PGBD3P0DP91 1061 aa19.54■□□□□ 0.72
KIF3C-204ENST00000455394 ATF3P18847 181 aa19.52■□□□□ 0.72
KIF3C-204ENST00000455394 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.72
KIF3C-204ENST00000455394 PLEKHH2Q8IVE3 1493 aa19.51■□□□□ 0.71
KIF3C-204ENST00000455394 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
KIF3C-204ENST00000455394 SRPK2P78362 688 aaKnown RBP19.5■□□□□ 0.71
KIF3C-204ENST00000455394 TEX14Q8IWB6 1497 aa19.5■□□□□ 0.71
KIF3C-204ENST00000455394 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
KIF3C-204ENST00000455394 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
KIF3C-204ENST00000455394 PAK3O75914 559 aaPredicted RBP19.48■□□□□ 0.71
KIF3C-204ENST00000455394 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms