RNA–Protein interactions for RNA: ENST00000455394.5

KIF3C-204, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-204ENST00000455394 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
KIF3C-204ENST00000455394 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
KIF3C-204ENST00000455394 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
KIF3C-204ENST00000455394 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
KIF3C-204ENST00000455394 ABCC9O60706 1549 aa24.05■■□□□ 1.44
KIF3C-204ENST00000455394 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
KIF3C-204ENST00000455394 APLP2Q06481 763 aa23.35■■□□□ 1.33
KIF3C-204ENST00000455394 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
KIF3C-204ENST00000455394 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
KIF3C-204ENST00000455394 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
KIF3C-204ENST00000455394 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
KIF3C-204ENST00000455394 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
KIF3C-204ENST00000455394 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
KIF3C-204ENST00000455394 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
KIF3C-204ENST00000455394 MYT1LQ9UL68 1186 aa22.64■■□□□ 1.21
KIF3C-204ENST00000455394 NACADO15069 1562 aa22.55■■□□□ 1.2
KIF3C-204ENST00000455394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
KIF3C-204ENST00000455394 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
KIF3C-204ENST00000455394 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
KIF3C-204ENST00000455394 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
KIF3C-204ENST00000455394 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
KIF3C-204ENST00000455394 FBLN2P98095 1184 aa22.41■■□□□ 1.18
KIF3C-204ENST00000455394 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
KIF3C-204ENST00000455394 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
KIF3C-204ENST00000455394 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
KIF3C-204ENST00000455394 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
KIF3C-204ENST00000455394 ERICH6Q7L0X2 663 aa21.98■■□□□ 1.11
KIF3C-204ENST00000455394 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
KIF3C-204ENST00000455394 ESF1Q9H501 851 aaKnown RBP21.86■■□□□ 1.09
KIF3C-204ENST00000455394 MYT1Q01538 1121 aa21.85■■□□□ 1.09
KIF3C-204ENST00000455394 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
KIF3C-204ENST00000455394 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
KIF3C-204ENST00000455394 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
KIF3C-204ENST00000455394 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
KIF3C-204ENST00000455394 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
KIF3C-204ENST00000455394 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.04
KIF3C-204ENST00000455394 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
KIF3C-204ENST00000455394 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
KIF3C-204ENST00000455394 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
KIF3C-204ENST00000455394 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
KIF3C-204ENST00000455394 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
KIF3C-204ENST00000455394 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
KIF3C-204ENST00000455394 BCANQ96GW7 911 aa21.39■■□□□ 1.01
KIF3C-204ENST00000455394 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
KIF3C-204ENST00000455394 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
KIF3C-204ENST00000455394 ITGAEP38570 1179 aa21.22■□□□□ 0.99
KIF3C-204ENST00000455394 NEFLP07196 543 aa21.21■□□□□ 0.99
KIF3C-204ENST00000455394 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
KIF3C-204ENST00000455394 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
KIF3C-204ENST00000455394 ZNF777Q9ULD5 760 aaPredicted RBP21.12■□□□□ 0.97
KIF3C-204ENST00000455394 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
KIF3C-204ENST00000455394 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
KIF3C-204ENST00000455394 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
KIF3C-204ENST00000455394 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
KIF3C-204ENST00000455394 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
KIF3C-204ENST00000455394 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
KIF3C-204ENST00000455394 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
KIF3C-204ENST00000455394 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
KIF3C-204ENST00000455394 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
KIF3C-204ENST00000455394 OSCARQ8IYS5 282 aa21■□□□□ 0.95
KIF3C-204ENST00000455394 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
KIF3C-204ENST00000455394 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
KIF3C-204ENST00000455394 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
KIF3C-204ENST00000455394 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
KIF3C-204ENST00000455394 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
KIF3C-204ENST00000455394 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
KIF3C-204ENST00000455394 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
KIF3C-204ENST00000455394 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
KIF3C-204ENST00000455394 CARMIL2Q6F5E8 1435 aa20.89■□□□□ 0.94
KIF3C-204ENST00000455394 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
KIF3C-204ENST00000455394 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
KIF3C-204ENST00000455394 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
KIF3C-204ENST00000455394 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
KIF3C-204ENST00000455394 EEA1Q15075 1411 aa20.78■□□□□ 0.92
KIF3C-204ENST00000455394 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
KIF3C-204ENST00000455394 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
KIF3C-204ENST00000455394 SOGA1O94964 1423 aa20.74■□□□□ 0.91
KIF3C-204ENST00000455394 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
KIF3C-204ENST00000455394 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
KIF3C-204ENST00000455394 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
KIF3C-204ENST00000455394 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
KIF3C-204ENST00000455394 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
KIF3C-204ENST00000455394 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
KIF3C-204ENST00000455394 HDGFP51858 240 aaKnown RBP20.63■□□□□ 0.89
KIF3C-204ENST00000455394 CUX2O14529 1486 aa20.63■□□□□ 0.89
KIF3C-204ENST00000455394 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
KIF3C-204ENST00000455394 NEFMP07197 916 aa20.6■□□□□ 0.89
KIF3C-204ENST00000455394 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
KIF3C-204ENST00000455394 CLIP1P30622 1438 aa20.59■□□□□ 0.89
KIF3C-204ENST00000455394 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
KIF3C-204ENST00000455394 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
KIF3C-204ENST00000455394 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
KIF3C-204ENST00000455394 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
KIF3C-204ENST00000455394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
KIF3C-204ENST00000455394 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.87
KIF3C-204ENST00000455394 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
KIF3C-204ENST00000455394 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
KIF3C-204ENST00000455394 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
KIF3C-204ENST00000455394 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
KIF3C-204ENST00000455394 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms