RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 SPDYE4A6NLX3 237 aa4.97□□□□□ -1.61
AC006539.3-201ENST00000454258 APLP2Q06481 763 aa4.96□□□□□ -1.62
AC006539.3-201ENST00000454258 NEFLP07196 543 aa4.95□□□□□ -1.62
AC006539.3-201ENST00000454258 BCL11AQ9H165 835 aa4.95□□□□□ -1.62
AC006539.3-201ENST00000454258 VASPP50552 380 aaPredicted RBP4.94□□□□□ -1.62
AC006539.3-201ENST00000454258 VPS8Q8N3P4 1428 aa4.94□□□□□ -1.62
AC006539.3-201ENST00000454258 PROM2Q8N271 834 aa4.93□□□□□ -1.62
AC006539.3-201ENST00000454258 MKRN4PQ13434 485 aaPredicted RBP4.92□□□□□ -1.62
AC006539.3-201ENST00000454258 PKD2Q13563 968 aa4.92□□□□□ -1.62
AC006539.3-201ENST00000454258 PABPN1Q86U42 306 aaKnown RBP eCLIP4.92□□□□□ -1.62
AC006539.3-201ENST00000454258 CUX2O14529 1486 aa4.92□□□□□ -1.62
AC006539.3-201ENST00000454258 ERICH6BQ5W0A0 696 aa4.91□□□□□ -1.62
AC006539.3-201ENST00000454258 SUPT16HQ9Y5B9 1047 aaKnown RBP4.91□□□□□ -1.62
AC006539.3-201ENST00000454258 ERICH3Q5RHP9 1530 aa4.91□□□□□ -1.62
AC006539.3-201ENST00000454258 MROH2BQ7Z745 1585 aa4.9□□□□□ -1.63
AC006539.3-201ENST00000454258 IFNLR1Q8IU57 520 aaPredicted RBP4.89□□□□□ -1.63
AC006539.3-201ENST00000454258 YTHDC1Q96MU7 727 aaKnown RBP4.89□□□□□ -1.63
AC006539.3-201ENST00000454258 CLIP1P30622 1438 aa4.89□□□□□ -1.63
AC006539.3-201ENST00000454258 SMARCA2P51531 1590 aa4.88□□□□□ -1.63
AC006539.3-201ENST00000454258 NPM1P06748 294 aaKnown RBP eCLIP4.88□□□□□ -1.63
AC006539.3-201ENST00000454258 HOMEZQ8IX15 550 aa4.88□□□□□ -1.63
AC006539.3-201ENST00000454258 WIZO95785 1651 aa4.88□□□□□ -1.63
AC006539.3-201ENST00000454258 FANCIQ9NVI1 1328 aa4.88□□□□□ -1.63
AC006539.3-201ENST00000454258 SMARCA4P51532 1647 aa4.87□□□□□ -1.63
AC006539.3-201ENST00000454258 TMEM132AQ24JP5 1023 aa4.87□□□□□ -1.63
AC006539.3-201ENST00000454258 FAM9AQ8IZU1 332 aaPredicted RBP4.87□□□□□ -1.63
AC006539.3-201ENST00000454258 MAP3K1Q13233 1512 aa4.87□□□□□ -1.63
AC006539.3-201ENST00000454258 PEG3Q9GZU2 1588 aa4.87□□□□□ -1.63
AC006539.3-201ENST00000454258 MIER1Q8N108 512 aa4.86□□□□□ -1.63
AC006539.3-201ENST00000454258 TSHZ2Q9NRE2 1034 aa4.86□□□□□ -1.63
AC006539.3-201ENST00000454258 RRBP1Q9P2E9 1410 aaKnown RBP4.86□□□□□ -1.63
AC006539.3-201ENST00000454258 CCER2I3L3R5 266 aa4.85□□□□□ -1.63
AC006539.3-201ENST00000454258 BBXQ8WY36 941 aaPredicted RBP4.84□□□□□ -1.63
AC006539.3-201ENST00000454258 CCDC88BA6NC98 1476 aa4.83□□□□□ -1.64
AC006539.3-201ENST00000454258 DHX57Q6P158 1386 aaKnown RBP4.83□□□□□ -1.64
AC006539.3-201ENST00000454258 TRHP20396 242 aaPredicted RBP4.83□□□□□ -1.64
AC006539.3-201ENST00000454258 POLA2Q14181 598 aa4.83□□□□□ -1.64
AC006539.3-201ENST00000454258 PAXIP1Q6ZW49 1069 aaPredicted RBP4.83□□□□□ -1.64
AC006539.3-201ENST00000454258 UBTFP17480 764 aaKnown RBP4.82□□□□□ -1.64
AC006539.3-201ENST00000454258 SYNJ1O43426 1573 aa4.82□□□□□ -1.64
AC006539.3-201ENST00000454258 ABCC8Q09428 1581 aa4.82□□□□□ -1.64
AC006539.3-201ENST00000454258 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
AC006539.3-201ENST00000454258 CECR2Q9BXF3 1484 aa4.81□□□□□ -1.64
AC006539.3-201ENST00000454258 DNAJC5Q9H3Z4 198 aa4.81□□□□□ -1.64
AC006539.3-201ENST00000454258 SPINK5Q9NQ38 1064 aaPredicted RBP4.81□□□□□ -1.64
AC006539.3-201ENST00000454258 CDK11AQ9UQ88 783 aaPredicted RBP4.81□□□□□ -1.64
AC006539.3-201ENST00000454258 CFAP44Q96MT7 982 aa4.8□□□□□ -1.64
AC006539.3-201ENST00000454258 TOP2BQ02880 1626 aa4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 CCNB3Q8WWL7 1395 aa4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 BIVM-ERCC5R4GMW8 1640 aa4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 RTL5Q5HYW3 569 aaPredicted RBP4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 SOGA1O94964 1423 aa4.79□□□□□ -1.64
AC006539.3-201ENST00000454258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 UNC13AQ9UPW8 1703 aa4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 ANP32CO43423 234 aa4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 CAPN15O75808 1086 aa4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 KLHL34Q8N239 644 aa4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 SPOCK2Q92563 424 aa4.78□□□□□ -1.64
AC006539.3-201ENST00000454258 ECM2O94769 699 aaPredicted RBP4.77□□□□□ -1.65
AC006539.3-201ENST00000454258 ZBTB12Q9Y330 459 aaPredicted RBP4.77□□□□□ -1.65
AC006539.3-201ENST00000454258 RBM19Q9Y4C8 960 aaKnown RBP4.77□□□□□ -1.65
AC006539.3-201ENST00000454258 FHAD1B1AJZ9 1412 aa4.77□□□□□ -1.65
AC006539.3-201ENST00000454258 CC2D2AQ9P2K1 1620 aa4.76□□□□□ -1.65
AC006539.3-201ENST00000454258 USP35Q9P2H5 1018 aa4.76□□□□□ -1.65
AC006539.3-201ENST00000454258 CFAP43Q8NDM7 1665 aa4.76□□□□□ -1.65
AC006539.3-201ENST00000454258 PRXQ9BXM0 1461 aa4.75□□□□□ -1.65
AC006539.3-201ENST00000454258 C14orf37Q86TY3 774 aa4.75□□□□□ -1.65
AC006539.3-201ENST00000454258 TIAM1Q13009 1591 aa4.74□□□□□ -1.65
AC006539.3-201ENST00000454258 ANP32AP39687 249 aaKnown RBP4.74□□□□□ -1.65
AC006539.3-201ENST00000454258 KIF27Q86VH2 1401 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 SETD5Q9C0A6 1442 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 EFCAB5A4FU69 1503 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 MAPKBP1O60336 1514 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 SPRYD3Q8NCJ5 442 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 RNF39Q9H2S5 420 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 PODXL2Q9NZ53 605 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 STAG3Q9UJ98 1225 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 ARAP1Q96P48 1450 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 RAPGEF2Q9Y4G8 1499 aa4.73□□□□□ -1.65
AC006539.3-201ENST00000454258 CUX1P39880 1505 aa4.72□□□□□ -1.65
AC006539.3-201ENST00000454258 PLCD3Q8N3E9 789 aa4.72□□□□□ -1.65
AC006539.3-201ENST00000454258 PPP4R2Q9NY27 417 aa4.72□□□□□ -1.65
AC006539.3-201ENST00000454258 CCDC18Q5T9S5 1454 aa4.72□□□□□ -1.65
AC006539.3-201ENST00000454258 KIF21AQ7Z4S6 1674 aa4.72□□□□□ -1.65
AC006539.3-201ENST00000454258 THOC2Q8NI27 1593 aaKnown RBP4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 AQRO60306 1485 aaKnown RBP eCLIP4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 RGL2O15211 777 aa4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 ABCB7O75027 752 aa4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 GLIPR1L2Q4G1C9 344 aa4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 NOP58Q9Y2X3 529 aaKnown RBP4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 PRDM2Q13029 1718 aa4.71□□□□□ -1.66
AC006539.3-201ENST00000454258 FYCO1Q9BQS8 1478 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 TONSLQ96HA7 1378 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 RAB3GAP2Q9H2M9 1393 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 POLR1AO95602 1720 aaPredicted RBP4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 C1QBPQ07021 282 aaKnown RBP4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 NBR1Q14596 966 aa4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 ZNF692Q9BU19 519 aaPredicted RBP4.7□□□□□ -1.66
AC006539.3-201ENST00000454258 ABCA5Q8WWZ7 1642 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms