RNA–Protein interactions for RNA: ENST00000454214.1

NDUFB3-204, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFB3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-204ENST00000454214 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
NDUFB3-204ENST00000454214 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.45
NDUFB3-204ENST00000454214 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
NDUFB3-204ENST00000454214 ABCB7O75027 752 aa12.23□□□□□ -0.45
NDUFB3-204ENST00000454214 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
NDUFB3-204ENST00000454214 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
NDUFB3-204ENST00000454214 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
NDUFB3-204ENST00000454214 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
NDUFB3-204ENST00000454214 CHD1O14646 1710 aa12.19□□□□□ -0.46
NDUFB3-204ENST00000454214 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
NDUFB3-204ENST00000454214 ARAP1Q96P48 1450 aa12.16□□□□□ -0.46
NDUFB3-204ENST00000454214 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
NDUFB3-204ENST00000454214 POLA2Q14181 598 aa12.14□□□□□ -0.47
NDUFB3-204ENST00000454214 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
NDUFB3-204ENST00000454214 SOGA1O94964 1423 aa12.13□□□□□ -0.47
NDUFB3-204ENST00000454214 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
NDUFB3-204ENST00000454214 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
NDUFB3-204ENST00000454214 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
NDUFB3-204ENST00000454214 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
NDUFB3-204ENST00000454214 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
NDUFB3-204ENST00000454214 GRIN2BQ13224 1484 aa12.01□□□□□ -0.49
NDUFB3-204ENST00000454214 MAGI1Q96QZ7 1491 aaPredicted RBP11.98□□□□□ -0.49
NDUFB3-204ENST00000454214 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
NDUFB3-204ENST00000454214 SYNJ2O15056 1496 aa11.96□□□□□ -0.49
NDUFB3-204ENST00000454214 SUPT5HO00267 1087 aaKnown RBP11.96□□□□□ -0.49
NDUFB3-204ENST00000454214 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.5
NDUFB3-204ENST00000454214 CUX1P39880 1505 aa11.93□□□□□ -0.5
NDUFB3-204ENST00000454214 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
NDUFB3-204ENST00000454214 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
NDUFB3-204ENST00000454214 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
NDUFB3-204ENST00000454214 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
NDUFB3-204ENST00000454214 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
NDUFB3-204ENST00000454214 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
NDUFB3-204ENST00000454214 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
NDUFB3-204ENST00000454214 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
NDUFB3-204ENST00000454214 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
NDUFB3-204ENST00000454214 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
NDUFB3-204ENST00000454214 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
NDUFB3-204ENST00000454214 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
NDUFB3-204ENST00000454214 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
NDUFB3-204ENST00000454214 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
NDUFB3-204ENST00000454214 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
NDUFB3-204ENST00000454214 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
NDUFB3-204ENST00000454214 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
NDUFB3-204ENST00000454214 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
NDUFB3-204ENST00000454214 NUP160Q12769 1436 aa11.72□□□□□ -0.53
NDUFB3-204ENST00000454214 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
NDUFB3-204ENST00000454214 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
NDUFB3-204ENST00000454214 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
NDUFB3-204ENST00000454214 KDM6BO15054 1643 aa11.65□□□□□ -0.54
NDUFB3-204ENST00000454214 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
NDUFB3-204ENST00000454214 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
NDUFB3-204ENST00000454214 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
NDUFB3-204ENST00000454214 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
NDUFB3-204ENST00000454214 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
NDUFB3-204ENST00000454214 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
NDUFB3-204ENST00000454214 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
NDUFB3-204ENST00000454214 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
NDUFB3-204ENST00000454214 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
NDUFB3-204ENST00000454214 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
NDUFB3-204ENST00000454214 PTPRGP23470 1445 aa11.59□□□□□ -0.55
NDUFB3-204ENST00000454214 DIP2BQ9P265 1576 aa11.58□□□□□ -0.55
NDUFB3-204ENST00000454214 ADCY10Q96PN6 1610 aa11.58□□□□□ -0.56
NDUFB3-204ENST00000454214 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
NDUFB3-204ENST00000454214 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
NDUFB3-204ENST00000454214 MAPKBP1O60336 1514 aa11.56□□□□□ -0.56
NDUFB3-204ENST00000454214 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
NDUFB3-204ENST00000454214 KIF27Q86VH2 1401 aa11.53□□□□□ -0.56
NDUFB3-204ENST00000454214 KIAA0586Q9BVV6 1533 aa11.53□□□□□ -0.56
NDUFB3-204ENST00000454214 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
NDUFB3-204ENST00000454214 TNIKQ9UKE5 1360 aa11.51□□□□□ -0.57
NDUFB3-204ENST00000454214 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
NDUFB3-204ENST00000454214 IGF1RP08069 1367 aa11.5□□□□□ -0.57
NDUFB3-204ENST00000454214 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
NDUFB3-204ENST00000454214 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
NDUFB3-204ENST00000454214 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
NDUFB3-204ENST00000454214 PLB1Q6P1J6 1458 aa11.47□□□□□ -0.57
NDUFB3-204ENST00000454214 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
NDUFB3-204ENST00000454214 CUL7Q14999 1698 aa11.46□□□□□ -0.57
NDUFB3-204ENST00000454214 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
NDUFB3-204ENST00000454214 ABCC2Q92887 1545 aa11.45□□□□□ -0.58
NDUFB3-204ENST00000454214 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
NDUFB3-204ENST00000454214 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
NDUFB3-204ENST00000454214 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
NDUFB3-204ENST00000454214 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
NDUFB3-204ENST00000454214 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
NDUFB3-204ENST00000454214 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
NDUFB3-204ENST00000454214 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
NDUFB3-204ENST00000454214 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
NDUFB3-204ENST00000454214 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
NDUFB3-204ENST00000454214 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
NDUFB3-204ENST00000454214 RANGAP1P46060 587 aaPredicted RBP11.37□□□□□ -0.59
NDUFB3-204ENST00000454214 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
NDUFB3-204ENST00000454214 GLI2P10070 1586 aa11.37□□□□□ -0.59
NDUFB3-204ENST00000454214 COL17A1Q9UMD9 1497 aaPredicted RBP11.35□□□□□ -0.59
NDUFB3-204ENST00000454214 ZCCHC11Q5TAX3 1644 aaKnown RBP11.35□□□□□ -0.59
NDUFB3-204ENST00000454214 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
NDUFB3-204ENST00000454214 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
NDUFB3-204ENST00000454214 UHRF1BP1LA0JNW5 1464 aa11.34□□□□□ -0.59
NDUFB3-204ENST00000454214 RAPGEF2Q9Y4G8 1499 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms