RNA–Protein interactions for RNA: ENST00000454214.1

NDUFB3-204, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFB3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-204ENST00000454214 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
NDUFB3-204ENST00000454214 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
NDUFB3-204ENST00000454214 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
NDUFB3-204ENST00000454214 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
NDUFB3-204ENST00000454214 FOXD1Q16676 465 aa16.56■□□□□ 0.24
NDUFB3-204ENST00000454214 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
NDUFB3-204ENST00000454214 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
NDUFB3-204ENST00000454214 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
NDUFB3-204ENST00000454214 ADRA2BP18089 450 aa15.69■□□□□ 0.1
NDUFB3-204ENST00000454214 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
NDUFB3-204ENST00000454214 MSH5O43196 834 aa15.29■□□□□ 0.04
NDUFB3-204ENST00000454214 ABCC9O60706 1549 aa15.25■□□□□ 0.03
NDUFB3-204ENST00000454214 CCDC180Q9P1Z9 1646 aa14.76□□□□□ -0.05
NDUFB3-204ENST00000454214 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
NDUFB3-204ENST00000454214 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
NDUFB3-204ENST00000454214 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
NDUFB3-204ENST00000454214 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
NDUFB3-204ENST00000454214 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
NDUFB3-204ENST00000454214 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
NDUFB3-204ENST00000454214 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
NDUFB3-204ENST00000454214 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
NDUFB3-204ENST00000454214 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
NDUFB3-204ENST00000454214 NACADO15069 1562 aa14.07□□□□□ -0.16
NDUFB3-204ENST00000454214 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
NDUFB3-204ENST00000454214 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
NDUFB3-204ENST00000454214 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
NDUFB3-204ENST00000454214 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
NDUFB3-204ENST00000454214 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
NDUFB3-204ENST00000454214 BICRAQ9NZM4 1560 aa13.76□□□□□ -0.21
NDUFB3-204ENST00000454214 KCNA4P22459 653 aa13.76□□□□□ -0.21
NDUFB3-204ENST00000454214 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
NDUFB3-204ENST00000454214 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.21
NDUFB3-204ENST00000454214 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
NDUFB3-204ENST00000454214 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
NDUFB3-204ENST00000454214 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
NDUFB3-204ENST00000454214 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
NDUFB3-204ENST00000454214 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
NDUFB3-204ENST00000454214 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
NDUFB3-204ENST00000454214 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
NDUFB3-204ENST00000454214 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
NDUFB3-204ENST00000454214 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
NDUFB3-204ENST00000454214 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
NDUFB3-204ENST00000454214 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
NDUFB3-204ENST00000454214 CUX2O14529 1486 aa13.1□□□□□ -0.31
NDUFB3-204ENST00000454214 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
NDUFB3-204ENST00000454214 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
NDUFB3-204ENST00000454214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■■■□ 21.3
NDUFB3-204ENST00000454214 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
NDUFB3-204ENST00000454214 NESP48681 1621 aa12.98□□□□□ -0.33
NDUFB3-204ENST00000454214 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
NDUFB3-204ENST00000454214 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
NDUFB3-204ENST00000454214 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
NDUFB3-204ENST00000454214 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
NDUFB3-204ENST00000454214 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
NDUFB3-204ENST00000454214 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
NDUFB3-204ENST00000454214 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
NDUFB3-204ENST00000454214 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
NDUFB3-204ENST00000454214 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
NDUFB3-204ENST00000454214 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
NDUFB3-204ENST00000454214 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
NDUFB3-204ENST00000454214 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
NDUFB3-204ENST00000454214 LAMC3Q9Y6N6 1575 aa12.75□□□□□ -0.37
NDUFB3-204ENST00000454214 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
NDUFB3-204ENST00000454214 ZBTB22O15209 634 aa12.73□□□□□ -0.37
NDUFB3-204ENST00000454214 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
NDUFB3-204ENST00000454214 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
NDUFB3-204ENST00000454214 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
NDUFB3-204ENST00000454214 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
NDUFB3-204ENST00000454214 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
NDUFB3-204ENST00000454214 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
NDUFB3-204ENST00000454214 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
NDUFB3-204ENST00000454214 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
NDUFB3-204ENST00000454214 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
NDUFB3-204ENST00000454214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
NDUFB3-204ENST00000454214 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
NDUFB3-204ENST00000454214 WIZO95785 1651 aa12.56□□□□□ -0.4
NDUFB3-204ENST00000454214 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
NDUFB3-204ENST00000454214 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
NDUFB3-204ENST00000454214 WDR62O43379 1518 aa12.54□□□□□ -0.4
NDUFB3-204ENST00000454214 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
NDUFB3-204ENST00000454214 FBLN2P98095 1184 aa12.46□□□□□ -0.41
NDUFB3-204ENST00000454214 CAPN15O75808 1086 aa12.45□□□□□ -0.42
NDUFB3-204ENST00000454214 APLP2Q06481 763 aa12.45□□□□□ -0.42
NDUFB3-204ENST00000454214 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
NDUFB3-204ENST00000454214 DSG3P32926 999 aa12.42□□□□□ -0.42
NDUFB3-204ENST00000454214 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
NDUFB3-204ENST00000454214 URB2Q14146 1524 aaKnown RBP12.41□□□□□ -0.42
NDUFB3-204ENST00000454214 CFTRP13569 1480 aa12.39□□□□□ -0.43
NDUFB3-204ENST00000454214 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
NDUFB3-204ENST00000454214 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
NDUFB3-204ENST00000454214 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
NDUFB3-204ENST00000454214 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
NDUFB3-204ENST00000454214 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
NDUFB3-204ENST00000454214 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
NDUFB3-204ENST00000454214 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
NDUFB3-204ENST00000454214 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
NDUFB3-204ENST00000454214 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
NDUFB3-204ENST00000454214 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
NDUFB3-204ENST00000454214 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
NDUFB3-204ENST00000454214 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms