RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEC22C-211ENST00000451653 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
SEC22C-211ENST00000451653 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
SEC22C-211ENST00000451653 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
SEC22C-211ENST00000451653 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
SEC22C-211ENST00000451653 HIRIP3Q9BW71 556 aaPredicted RBP11.05□□□□□ -0.64
SEC22C-211ENST00000451653 NPHP1O15259 732 aa11.04□□□□□ -0.64
SEC22C-211ENST00000451653 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
SEC22C-211ENST00000451653 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
SEC22C-211ENST00000451653 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
SEC22C-211ENST00000451653 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
SEC22C-211ENST00000451653 SOGA1O94964 1423 aa11.01□□□□□ -0.65
SEC22C-211ENST00000451653 EEA1Q15075 1411 aa11.01□□□□□ -0.65
SEC22C-211ENST00000451653 ABCC8Q09428 1581 aa11□□□□□ -0.65
SEC22C-211ENST00000451653 WDR43Q15061 677 aaKnown RBP eCLIP11□□□□□ -0.65
SEC22C-211ENST00000451653 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
SEC22C-211ENST00000451653 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
SEC22C-211ENST00000451653 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
SEC22C-211ENST00000451653 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
SEC22C-211ENST00000451653 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
SEC22C-211ENST00000451653 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
SEC22C-211ENST00000451653 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
SEC22C-211ENST00000451653 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
SEC22C-211ENST00000451653 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
SEC22C-211ENST00000451653 WIZO95785 1651 aa10.95□□□□□ -0.66
SEC22C-211ENST00000451653 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
SEC22C-211ENST00000451653 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
SEC22C-211ENST00000451653 CLSTN1O94985 981 aa10.94□□□□□ -0.66
SEC22C-211ENST00000451653 MIER1Q8N108 512 aa10.94□□□□□ -0.66
SEC22C-211ENST00000451653 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEC22C-211ENST00000451653 FKBP8Q14318 412 aa10.93□□□□□ -0.66
SEC22C-211ENST00000451653 TMC1Q8TDI8 760 aa10.91□□□□□ -0.66
SEC22C-211ENST00000451653 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
SEC22C-211ENST00000451653 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
SEC22C-211ENST00000451653 CUX2O14529 1486 aa10.9□□□□□ -0.66
SEC22C-211ENST00000451653 ARID4BQ4LE39 1312 aaPredicted RBP10.9□□□□□ -0.66
SEC22C-211ENST00000451653 CCDC136Q96JN2 1154 aa10.89□□□□□ -0.67
SEC22C-211ENST00000451653 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
SEC22C-211ENST00000451653 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
SEC22C-211ENST00000451653 TRIM44Q96DX7 344 aaPredicted RBP10.88□□□□□ -0.67
SEC22C-211ENST00000451653 EIF4G1Q04637 1599 aaKnown RBP10.88□□□□□ -0.67
SEC22C-211ENST00000451653 GOLGA6L22H0YM25 854 aa10.87□□□□□ -0.67
SEC22C-211ENST00000451653 LMOD2Q6P5Q4 547 aa10.87□□□□□ -0.67
SEC22C-211ENST00000451653 PTMAP06454 111 aaKnown RBP10.87□□□□□ -0.67
SEC22C-211ENST00000451653 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
SEC22C-211ENST00000451653 NBR1Q14596 966 aa10.87□□□□□ -0.67
SEC22C-211ENST00000451653 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
SEC22C-211ENST00000451653 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
SEC22C-211ENST00000451653 CASC1Q6TDU7 716 aa10.85□□□□□ -0.67
SEC22C-211ENST00000451653 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
SEC22C-211ENST00000451653 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
SEC22C-211ENST00000451653 PRM3Q9NNZ6 103 aa10.85□□□□□ -0.67
SEC22C-211ENST00000451653 RGL3Q3MIN7 710 aa10.85□□□□□ -0.67
SEC22C-211ENST00000451653 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
SEC22C-211ENST00000451653 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
SEC22C-211ENST00000451653 ISY1Q9ULR0 285 aaKnown RBP10.83□□□□□ -0.68
SEC22C-211ENST00000451653 IRX6P78412 446 aaPredicted RBP10.83□□□□□ -0.68
SEC22C-211ENST00000451653 DNTTIP2Q5QJE6 756 aaKnown RBP10.83□□□□□ -0.68
SEC22C-211ENST00000451653 BECN1Q14457 450 aa10.82□□□□□ -0.68
SEC22C-211ENST00000451653 TOP2AP11388 1531 aaKnown RBP10.82□□□□□ -0.68
SEC22C-211ENST00000451653 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
SEC22C-211ENST00000451653 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.68
SEC22C-211ENST00000451653 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
SEC22C-211ENST00000451653 GOLGA6L6A8MZA4 724 aa10.8□□□□□ -0.68
SEC22C-211ENST00000451653 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
SEC22C-211ENST00000451653 FGD1P98174 961 aa10.8□□□□□ -0.68
SEC22C-211ENST00000451653 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
SEC22C-211ENST00000451653 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
SEC22C-211ENST00000451653 OS9Q13438 667 aaPredicted RBP10.77□□□□□ -0.69
SEC22C-211ENST00000451653 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
SEC22C-211ENST00000451653 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
SEC22C-211ENST00000451653 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.69
SEC22C-211ENST00000451653 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
SEC22C-211ENST00000451653 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
SEC22C-211ENST00000451653 SMARCA4P51532 1647 aa10.75□□□□□ -0.69
SEC22C-211ENST00000451653 NRDCO43847 1150 aa10.74□□□□□ -0.69
SEC22C-211ENST00000451653 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
SEC22C-211ENST00000451653 FHAD1B1AJZ9 1412 aa10.74□□□□□ -0.69
SEC22C-211ENST00000451653 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
SEC22C-211ENST00000451653 KCNJ4P48050 445 aa10.73□□□□□ -0.69
SEC22C-211ENST00000451653 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
SEC22C-211ENST00000451653 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
SEC22C-211ENST00000451653 RUSC2Q8N2Y8 1516 aa10.72□□□□□ -0.69
SEC22C-211ENST00000451653 ATAD2BQ9ULI0 1458 aa10.72□□□□□ -0.69
SEC22C-211ENST00000451653 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
SEC22C-211ENST00000451653 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.7
SEC22C-211ENST00000451653 FOXD1Q16676 465 aa10.7□□□□□ -0.7
SEC22C-211ENST00000451653 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
SEC22C-211ENST00000451653 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
SEC22C-211ENST00000451653 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
SEC22C-211ENST00000451653 RAPGEF2Q9Y4G8 1499 aa10.69□□□□□ -0.7
SEC22C-211ENST00000451653 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
SEC22C-211ENST00000451653 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
SEC22C-211ENST00000451653 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
SEC22C-211ENST00000451653 GOLGA6L4A6NEF3 574 aa10.67□□□□□ -0.7
SEC22C-211ENST00000451653 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
SEC22C-211ENST00000451653 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
SEC22C-211ENST00000451653 POGKQ9P215 609 aa10.67□□□□□ -0.7
SEC22C-211ENST00000451653 NOC3LQ8WTT2 800 aaKnown RBP10.65□□□□□ -0.7
SEC22C-211ENST00000451653 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms