RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
SEC22C-211ENST00000451653 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
SEC22C-211ENST00000451653 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
SEC22C-211ENST00000451653 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
SEC22C-211ENST00000451653 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
SEC22C-211ENST00000451653 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
SEC22C-211ENST00000451653 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
SEC22C-211ENST00000451653 APLP2Q06481 763 aa13.02□□□□□ -0.32
SEC22C-211ENST00000451653 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
SEC22C-211ENST00000451653 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
SEC22C-211ENST00000451653 TTBK1Q5TCY1 1321 aaPredicted RBP12.67□□□□□ -0.38
SEC22C-211ENST00000451653 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
SEC22C-211ENST00000451653 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
SEC22C-211ENST00000451653 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
SEC22C-211ENST00000451653 TRIM41Q8WV44 630 aa12.52□□□□□ -0.4
SEC22C-211ENST00000451653 NEFLP07196 543 aa12.42□□□□□ -0.42
SEC22C-211ENST00000451653 CENPBP07199 599 aaPredicted RBP12.41□□□□□ -0.42
SEC22C-211ENST00000451653 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
SEC22C-211ENST00000451653 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.43
SEC22C-211ENST00000451653 UBTFP17480 764 aaKnown RBP12.32□□□□□ -0.44
SEC22C-211ENST00000451653 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
SEC22C-211ENST00000451653 MYT1Q01538 1121 aa12.29□□□□□ -0.44
SEC22C-211ENST00000451653 ABCC9O60706 1549 aa12.2□□□□□ -0.46
SEC22C-211ENST00000451653 CHIC1Q5VXU3 224 aa12.2□□□□□ -0.46
SEC22C-211ENST00000451653 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
SEC22C-211ENST00000451653 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
SEC22C-211ENST00000451653 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
SEC22C-211ENST00000451653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.47
SEC22C-211ENST00000451653 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.47
SEC22C-211ENST00000451653 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
SEC22C-211ENST00000451653 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
SEC22C-211ENST00000451653 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC22C-211ENST00000451653 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.48
SEC22C-211ENST00000451653 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
SEC22C-211ENST00000451653 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
SEC22C-211ENST00000451653 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
SEC22C-211ENST00000451653 ITGAEP38570 1179 aa11.96□□□□□ -0.5
SEC22C-211ENST00000451653 HRCP23327 699 aa11.85□□□□□ -0.51
SEC22C-211ENST00000451653 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
SEC22C-211ENST00000451653 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
SEC22C-211ENST00000451653 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.51
SEC22C-211ENST00000451653 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
SEC22C-211ENST00000451653 ZCCHC6Q5VYS8 1495 aaKnown RBP11.75□□□□□ -0.53
SEC22C-211ENST00000451653 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
SEC22C-211ENST00000451653 BCANQ96GW7 911 aa11.72□□□□□ -0.53
SEC22C-211ENST00000451653 FAM50AQ14320 339 aaKnown RBP11.65□□□□□ -0.54
SEC22C-211ENST00000451653 CCDC180Q9P1Z9 1646 aa11.64□□□□□ -0.55
SEC22C-211ENST00000451653 NEFMP07197 916 aa11.63□□□□□ -0.55
SEC22C-211ENST00000451653 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
SEC22C-211ENST00000451653 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
SEC22C-211ENST00000451653 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
SEC22C-211ENST00000451653 FBLN2P98095 1184 aa11.56□□□□□ -0.56
SEC22C-211ENST00000451653 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
SEC22C-211ENST00000451653 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
SEC22C-211ENST00000451653 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
SEC22C-211ENST00000451653 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
SEC22C-211ENST00000451653 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
SEC22C-211ENST00000451653 ESF1Q9H501 851 aaKnown RBP11.5□□□□□ -0.57
SEC22C-211ENST00000451653 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
SEC22C-211ENST00000451653 CDK11BP21127 795 aaKnown RBP11.43□□□□□ -0.58
SEC22C-211ENST00000451653 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
SEC22C-211ENST00000451653 ANP32BQ92688 251 aaKnown RBP11.4□□□□□ -0.58
SEC22C-211ENST00000451653 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
SEC22C-211ENST00000451653 A0A0G2JS52 829 aa11.37□□□□□ -0.59
SEC22C-211ENST00000451653 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
SEC22C-211ENST00000451653 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
SEC22C-211ENST00000451653 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
SEC22C-211ENST00000451653 ANP32CO43423 234 aa11.36□□□□□ -0.59
SEC22C-211ENST00000451653 RSF1Q96T23 1441 aaPredicted RBP11.34□□□□□ -0.59
SEC22C-211ENST00000451653 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
SEC22C-211ENST00000451653 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
SEC22C-211ENST00000451653 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
SEC22C-211ENST00000451653 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
SEC22C-211ENST00000451653 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
SEC22C-211ENST00000451653 ANP32AP39687 249 aaKnown RBP11.26□□□□□ -0.61
SEC22C-211ENST00000451653 NACADO15069 1562 aa11.25□□□□□ -0.61
SEC22C-211ENST00000451653 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
SEC22C-211ENST00000451653 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
SEC22C-211ENST00000451653 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.62
SEC22C-211ENST00000451653 CECR2Q9BXF3 1484 aa11.2□□□□□ -0.62
SEC22C-211ENST00000451653 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
SEC22C-211ENST00000451653 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
SEC22C-211ENST00000451653 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
SEC22C-211ENST00000451653 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
SEC22C-211ENST00000451653 ZBTB7CA1YPR0 619 aa11.17□□□□□ -0.62
SEC22C-211ENST00000451653 CLIP1P30622 1438 aa11.15□□□□□ -0.62
SEC22C-211ENST00000451653 PLEKHG5O94827 1062 aa11.15□□□□□ -0.63
SEC22C-211ENST00000451653 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
SEC22C-211ENST00000451653 CEP162Q5TB80 1403 aa11.12□□□□□ -0.63
SEC22C-211ENST00000451653 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
SEC22C-211ENST00000451653 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
SEC22C-211ENST00000451653 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
SEC22C-211ENST00000451653 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
SEC22C-211ENST00000451653 TONSLQ96HA7 1378 aa11.09□□□□□ -0.63
SEC22C-211ENST00000451653 CHMP7Q8WUX9 453 aaPredicted RBP11.09□□□□□ -0.63
SEC22C-211ENST00000451653 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
SEC22C-211ENST00000451653 ARXQ96QS3 562 aa11.08□□□□□ -0.64
SEC22C-211ENST00000451653 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
SEC22C-211ENST00000451653 MYH16Q9H6N6 1097 aa11.07□□□□□ -0.64
SEC22C-211ENST00000451653 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms