RNA–Protein interactions for RNA: ENST00000451497.1

HMGB1P5-202, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 985 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-202ENST00000451497 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
HMGB1P5-202ENST00000451497 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
HMGB1P5-202ENST00000451497 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
HMGB1P5-202ENST00000451497 SCUBE2Q9NQ36 999 aa11.86□□□□□ -0.51
HMGB1P5-202ENST00000451497 PHF12Q96QT6 1004 aa11.84□□□□□ -0.51
HMGB1P5-202ENST00000451497 C7P10643 843 aa11.82□□□□□ -0.52
HMGB1P5-202ENST00000451497 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
HMGB1P5-202ENST00000451497 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P5-202ENST00000451497 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
HMGB1P5-202ENST00000451497 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
HMGB1P5-202ENST00000451497 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
HMGB1P5-202ENST00000451497 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
HMGB1P5-202ENST00000451497 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
HMGB1P5-202ENST00000451497 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
HMGB1P5-202ENST00000451497 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
HMGB1P5-202ENST00000451497 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
HMGB1P5-202ENST00000451497 ST18O60284 1047 aa11.57□□□□□ -0.56
HMGB1P5-202ENST00000451497 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
HMGB1P5-202ENST00000451497 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P5-202ENST00000451497 PROM2Q8N271 834 aa11.51□□□□□ -0.57
HMGB1P5-202ENST00000451497 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
HMGB1P5-202ENST00000451497 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
HMGB1P5-202ENST00000451497 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
HMGB1P5-202ENST00000451497 PLCB2Q00722 1185 aa11.38□□□□□ -0.59
HMGB1P5-202ENST00000451497 COLQQ9Y215 455 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P5-202ENST00000451497 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGB1P5-202ENST00000451497 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P5-202ENST00000451497 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P5-202ENST00000451497 SEC24BO95487 1268 aa11.34□□□□□ -0.59
HMGB1P5-202ENST00000451497 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
HMGB1P5-202ENST00000451497 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
HMGB1P5-202ENST00000451497 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
HMGB1P5-202ENST00000451497 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
HMGB1P5-202ENST00000451497 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
HMGB1P5-202ENST00000451497 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
HMGB1P5-202ENST00000451497 PKD2Q13563 968 aa11.21□□□□□ -0.61
HMGB1P5-202ENST00000451497 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
HMGB1P5-202ENST00000451497 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
HMGB1P5-202ENST00000451497 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
HMGB1P5-202ENST00000451497 TIE1P35590 1138 aa11.17□□□□□ -0.62
HMGB1P5-202ENST00000451497 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
HMGB1P5-202ENST00000451497 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
HMGB1P5-202ENST00000451497 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
HMGB1P5-202ENST00000451497 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
HMGB1P5-202ENST00000451497 MIER1Q8N108 512 aa11.13□□□□□ -0.63
HMGB1P5-202ENST00000451497 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P5-202ENST00000451497 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P5-202ENST00000451497 PLEKHG5O94827 1062 aa11.12□□□□□ -0.63
HMGB1P5-202ENST00000451497 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
HMGB1P5-202ENST00000451497 BCANQ96GW7 911 aa11.1□□□□□ -0.63
HMGB1P5-202ENST00000451497 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
HMGB1P5-202ENST00000451497 SNPHO15079 494 aa11.08□□□□□ -0.64
HMGB1P5-202ENST00000451497 IER5LQ5T953 404 aa11.08□□□□□ -0.64
HMGB1P5-202ENST00000451497 EMP3P54852 163 aa11.07□□□□□ -0.64
HMGB1P5-202ENST00000451497 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
HMGB1P5-202ENST00000451497 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
HMGB1P5-202ENST00000451497 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
HMGB1P5-202ENST00000451497 MAP3K13O43283 966 aa11.05□□□□□ -0.64
HMGB1P5-202ENST00000451497 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
HMGB1P5-202ENST00000451497 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
HMGB1P5-202ENST00000451497 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
HMGB1P5-202ENST00000451497 FAM205CA6NFA0 338 aa11□□□□□ -0.65
HMGB1P5-202ENST00000451497 CFAP44Q96MT7 982 aa11□□□□□ -0.65
HMGB1P5-202ENST00000451497 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
HMGB1P5-202ENST00000451497 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
HMGB1P5-202ENST00000451497 PLCG2P16885 1265 aa10.96□□□□□ -0.65
HMGB1P5-202ENST00000451497 RASEFQ8IZ41 740 aa10.96□□□□□ -0.65
HMGB1P5-202ENST00000451497 NUBP1P53384 320 aa10.93□□□□□ -0.66
HMGB1P5-202ENST00000451497 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P5-202ENST00000451497 RGL2O15211 777 aa10.92□□□□□ -0.66
HMGB1P5-202ENST00000451497 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
HMGB1P5-202ENST00000451497 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
HMGB1P5-202ENST00000451497 TAOK2Q9UL54 1235 aa10.88□□□□□ -0.67
HMGB1P5-202ENST00000451497 PRKCSHP14314 528 aaPredicted RBP10.86□□□□□ -0.67
HMGB1P5-202ENST00000451497 KDM2AQ9Y2K7 1162 aa10.86□□□□□ -0.67
HMGB1P5-202ENST00000451497 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
HMGB1P5-202ENST00000451497 IRX5P78411 483 aaPredicted RBP10.84□□□□□ -0.67
HMGB1P5-202ENST00000451497 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
HMGB1P5-202ENST00000451497 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
HMGB1P5-202ENST00000451497 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
HMGB1P5-202ENST00000451497 MYT1LQ9UL68 1186 aa10.8□□□□□ -0.68
HMGB1P5-202ENST00000451497 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
HMGB1P5-202ENST00000451497 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
HMGB1P5-202ENST00000451497 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.69
HMGB1P5-202ENST00000451497 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
HMGB1P5-202ENST00000451497 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
HMGB1P5-202ENST00000451497 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
HMGB1P5-202ENST00000451497 GSE1Q14687 1217 aa10.72□□□□□ -0.69
HMGB1P5-202ENST00000451497 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
HMGB1P5-202ENST00000451497 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
HMGB1P5-202ENST00000451497 NBR1Q14596 966 aa10.66□□□□□ -0.7
HMGB1P5-202ENST00000451497 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
HMGB1P5-202ENST00000451497 PYGBP11216 843 aa10.65□□□□□ -0.7
HMGB1P5-202ENST00000451497 CHRM1P11229 460 aaPredicted RBP10.62□□□□□ -0.71
HMGB1P5-202ENST00000451497 ERBB3P21860 1342 aa10.59□□□□□ -0.71
HMGB1P5-202ENST00000451497 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
HMGB1P5-202ENST00000451497 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
HMGB1P5-202ENST00000451497 PCDHB8Q9UN66 801 aa10.57□□□□□ -0.72
HMGB1P5-202ENST00000451497 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
HMGB1P5-202ENST00000451497 ZNF467Q7Z7K2 595 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms