RNA–Protein interactions for RNA: ENST00000451497.1

HMGB1P5-202, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 985 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-202ENST00000451497 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
HMGB1P5-202ENST00000451497 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
HMGB1P5-202ENST00000451497 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
HMGB1P5-202ENST00000451497 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
HMGB1P5-202ENST00000451497 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
HMGB1P5-202ENST00000451497 FOXD1Q16676 465 aa19.93■□□□□ 0.78
HMGB1P5-202ENST00000451497 MSH5O43196 834 aa19.08■□□□□ 0.64
HMGB1P5-202ENST00000451497 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
HMGB1P5-202ENST00000451497 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
HMGB1P5-202ENST00000451497 ADRA2BP18089 450 aa17.6■□□□□ 0.41
HMGB1P5-202ENST00000451497 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
HMGB1P5-202ENST00000451497 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
HMGB1P5-202ENST00000451497 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
HMGB1P5-202ENST00000451497 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
HMGB1P5-202ENST00000451497 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
HMGB1P5-202ENST00000451497 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
HMGB1P5-202ENST00000451497 POTEHQ6S545 545 aa16.05■□□□□ 0.16
HMGB1P5-202ENST00000451497 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
HMGB1P5-202ENST00000451497 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
HMGB1P5-202ENST00000451497 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
HMGB1P5-202ENST00000451497 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
HMGB1P5-202ENST00000451497 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
HMGB1P5-202ENST00000451497 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
HMGB1P5-202ENST00000451497 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
HMGB1P5-202ENST00000451497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
HMGB1P5-202ENST00000451497 DSG3P32926 999 aa14.76□□□□□ -0.05
HMGB1P5-202ENST00000451497 CAPN15O75808 1086 aa14.59□□□□□ -0.07
HMGB1P5-202ENST00000451497 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P5-202ENST00000451497 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
HMGB1P5-202ENST00000451497 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
HMGB1P5-202ENST00000451497 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
HMGB1P5-202ENST00000451497 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
HMGB1P5-202ENST00000451497 KCNA4P22459 653 aa14.25□□□□□ -0.13
HMGB1P5-202ENST00000451497 ABCB7O75027 752 aa14.17□□□□□ -0.14
HMGB1P5-202ENST00000451497 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
HMGB1P5-202ENST00000451497 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
HMGB1P5-202ENST00000451497 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
HMGB1P5-202ENST00000451497 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
HMGB1P5-202ENST00000451497 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P5-202ENST00000451497 HAX1O00165 279 aa13.81□□□□□ -0.2
HMGB1P5-202ENST00000451497 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
HMGB1P5-202ENST00000451497 APLP2Q06481 763 aa13.74□□□□□ -0.21
HMGB1P5-202ENST00000451497 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
HMGB1P5-202ENST00000451497 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
HMGB1P5-202ENST00000451497 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
HMGB1P5-202ENST00000451497 EVX2Q03828 476 aa13.56□□□□□ -0.24
HMGB1P5-202ENST00000451497 LHX8Q68G74 356 aa13.54□□□□□ -0.24
HMGB1P5-202ENST00000451497 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
HMGB1P5-202ENST00000451497 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
HMGB1P5-202ENST00000451497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P5-202ENST00000451497 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
HMGB1P5-202ENST00000451497 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P5-202ENST00000451497 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGB1P5-202ENST00000451497 POLA2Q14181 598 aa13.37□□□□□ -0.27
HMGB1P5-202ENST00000451497 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
HMGB1P5-202ENST00000451497 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
HMGB1P5-202ENST00000451497 GABBR2O75899 941 aa13.15□□□□□ -0.3
HMGB1P5-202ENST00000451497 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
HMGB1P5-202ENST00000451497 ZBTB22O15209 634 aa13.07□□□□□ -0.32
HMGB1P5-202ENST00000451497 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
HMGB1P5-202ENST00000451497 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
HMGB1P5-202ENST00000451497 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
HMGB1P5-202ENST00000451497 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
HMGB1P5-202ENST00000451497 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
HMGB1P5-202ENST00000451497 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
HMGB1P5-202ENST00000451497 POTEMA6NI47 508 aa12.84□□□□□ -0.35
HMGB1P5-202ENST00000451497 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
HMGB1P5-202ENST00000451497 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
HMGB1P5-202ENST00000451497 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
HMGB1P5-202ENST00000451497 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
HMGB1P5-202ENST00000451497 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
HMGB1P5-202ENST00000451497 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
HMGB1P5-202ENST00000451497 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
HMGB1P5-202ENST00000451497 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P5-202ENST00000451497 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
HMGB1P5-202ENST00000451497 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
HMGB1P5-202ENST00000451497 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
HMGB1P5-202ENST00000451497 CLCN6P51797 869 aa12.39□□□□□ -0.43
HMGB1P5-202ENST00000451497 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P5-202ENST00000451497 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
HMGB1P5-202ENST00000451497 FKBP8Q14318 412 aa12.31□□□□□ -0.44
HMGB1P5-202ENST00000451497 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
HMGB1P5-202ENST00000451497 FBLN2P98095 1184 aa12.26□□□□□ -0.45
HMGB1P5-202ENST00000451497 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
HMGB1P5-202ENST00000451497 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P5-202ENST00000451497 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P5-202ENST00000451497 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P5-202ENST00000451497 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P5-202ENST00000451497 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
HMGB1P5-202ENST00000451497 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
HMGB1P5-202ENST00000451497 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P5-202ENST00000451497 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
HMGB1P5-202ENST00000451497 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
HMGB1P5-202ENST00000451497 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
HMGB1P5-202ENST00000451497 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
HMGB1P5-202ENST00000451497 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
HMGB1P5-202ENST00000451497 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms