RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CARMIL1Q5VZK9 1371 aa8.08□□□□□ -1.12
LMO3-209ENST00000447609 GAPVD1Q14C86 1478 aa8.08□□□□□ -1.12
LMO3-209ENST00000447609 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
LMO3-209ENST00000447609 CUX1P39880 1505 aa8.07□□□□□ -1.12
LMO3-209ENST00000447609 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
LMO3-209ENST00000447609 GRIN2BQ13224 1484 aa8.04□□□□□ -1.12
LMO3-209ENST00000447609 EEA1Q15075 1411 aa8.04□□□□□ -1.12
LMO3-209ENST00000447609 HOXD11P31277 338 aaPredicted RBP8.03□□□□□ -1.12
LMO3-209ENST00000447609 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
LMO3-209ENST00000447609 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
LMO3-209ENST00000447609 SYNJ1O43426 1573 aa8.02□□□□□ -1.12
LMO3-209ENST00000447609 TRHP20396 242 aaPredicted RBP8.02□□□□□ -1.13
LMO3-209ENST00000447609 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
LMO3-209ENST00000447609 WDR62O43379 1518 aa8.02□□□□□ -1.13
LMO3-209ENST00000447609 JPH4Q96JJ6 628 aa8.01□□□□□ -1.13
LMO3-209ENST00000447609 PRDM2Q13029 1718 aa8□□□□□ -1.13
LMO3-209ENST00000447609 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
LMO3-209ENST00000447609 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
LMO3-209ENST00000447609 TOP2BQ02880 1626 aa8□□□□□ -1.13
LMO3-209ENST00000447609 PPP4R3CPQ6ZMV5 832 aa7.99□□□□□ -1.13
LMO3-209ENST00000447609 IGF1RP08069 1367 aa7.98□□□□□ -1.13
LMO3-209ENST00000447609 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
LMO3-209ENST00000447609 RUSC2Q8N2Y8 1516 aa7.97□□□□□ -1.13
LMO3-209ENST00000447609 MAPK8IP2Q13387 824 aaPredicted RBP7.97□□□□□ -1.13
LMO3-209ENST00000447609 ABCA10Q8WWZ4 1543 aa7.97□□□□□ -1.13
LMO3-209ENST00000447609 CNKSR2Q8WXI2 1034 aa7.96□□□□□ -1.14
LMO3-209ENST00000447609 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.14
LMO3-209ENST00000447609 CARMIL2Q6F5E8 1435 aa7.96□□□□□ -1.14
LMO3-209ENST00000447609 ANP32EQ9BTT0 268 aa7.95□□□□□ -1.14
LMO3-209ENST00000447609 GOLGA3Q08378 1498 aa7.95□□□□□ -1.14
LMO3-209ENST00000447609 CDK11AQ9UQ88 783 aaPredicted RBP7.94□□□□□ -1.14
LMO3-209ENST00000447609 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
LMO3-209ENST00000447609 RNF216Q9NWF9 866 aaPredicted RBP7.94□□□□□ -1.14
LMO3-209ENST00000447609 YTHDC1Q96MU7 727 aaKnown RBP7.93□□□□□ -1.14
LMO3-209ENST00000447609 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
LMO3-209ENST00000447609 BCL11AQ9H165 835 aa7.92□□□□□ -1.14
LMO3-209ENST00000447609 SYNJ2O15056 1496 aa7.92□□□□□ -1.14
LMO3-209ENST00000447609 BIVM-ERCC5R4GMW8 1640 aa7.91□□□□□ -1.14
LMO3-209ENST00000447609 EIF4G3O43432 1585 aaKnown RBP7.9□□□□□ -1.14
LMO3-209ENST00000447609 PLEKHD1A6NEE1 506 aa7.89□□□□□ -1.15
LMO3-209ENST00000447609 PTPRGP23470 1445 aa7.89□□□□□ -1.15
LMO3-209ENST00000447609 CLIP1P30622 1438 aa7.89□□□□□ -1.15
LMO3-209ENST00000447609 GRIN2AQ12879 1464 aa7.88□□□□□ -1.15
LMO3-209ENST00000447609 PRG4Q92954 1404 aaPredicted RBP7.88□□□□□ -1.15
LMO3-209ENST00000447609 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
LMO3-209ENST00000447609 DNAJC5Q9H3Z4 198 aa7.87□□□□□ -1.15
LMO3-209ENST00000447609 ZNF777Q9ULD5 760 aaPredicted RBP7.87□□□□□ -1.15
LMO3-209ENST00000447609 ITGAEP38570 1179 aa7.85□□□□□ -1.15
LMO3-209ENST00000447609 TNIKQ9UKE5 1360 aa7.85□□□□□ -1.15
LMO3-209ENST00000447609 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
LMO3-209ENST00000447609 NCBP3Q53F19 620 aaKnown RBP7.84□□□□□ -1.15
LMO3-209ENST00000447609 KIAA0586Q9BVV6 1533 aa7.83□□□□□ -1.16
LMO3-209ENST00000447609 ERICH6Q7L0X2 663 aa7.82□□□□□ -1.16
LMO3-209ENST00000447609 MIER1Q8N108 512 aa7.82□□□□□ -1.16
LMO3-209ENST00000447609 FHOD3Q2V2M9 1422 aa7.82□□□□□ -1.16
LMO3-209ENST00000447609 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
LMO3-209ENST00000447609 MTUS2Q5JR59 1369 aa7.82□□□□□ -1.16
LMO3-209ENST00000447609 CEP162Q5TB80 1403 aa7.81□□□□□ -1.16
LMO3-209ENST00000447609 CUL7Q14999 1698 aa7.81□□□□□ -1.16
LMO3-209ENST00000447609 SUPT16HQ9Y5B9 1047 aaKnown RBP7.8□□□□□ -1.16
LMO3-209ENST00000447609 PRXQ9BXM0 1461 aa7.8□□□□□ -1.16
LMO3-209ENST00000447609 FAM69CQ0P6D2 419 aa7.8□□□□□ -1.16
LMO3-209ENST00000447609 PBRM1Q86U86 1689 aa7.79□□□□□ -1.16
LMO3-209ENST00000447609 ADAMTS12P58397 1594 aa7.79□□□□□ -1.16
LMO3-209ENST00000447609 WDR97A6NE52 1622 aa7.79□□□□□ -1.16
LMO3-209ENST00000447609 ABCA5Q8WWZ7 1642 aa7.78□□□□□ -1.16
LMO3-209ENST00000447609 FMN1Q68DA7 1419 aa7.78□□□□□ -1.16
LMO3-209ENST00000447609 TSHZ2Q9NRE2 1034 aa7.77□□□□□ -1.17
LMO3-209ENST00000447609 IQGAP2Q13576 1575 aa7.77□□□□□ -1.17
LMO3-209ENST00000447609 NEFLP07196 543 aa7.76□□□□□ -1.17
LMO3-209ENST00000447609 ESF1Q9H501 851 aaKnown RBP7.75□□□□□ -1.17
LMO3-209ENST00000447609 NUP160Q12769 1436 aa7.75□□□□□ -1.17
LMO3-209ENST00000447609 CHD1O14646 1710 aa7.75□□□□□ -1.17
LMO3-209ENST00000447609 CFDP1Q9UEE9 299 aaPredicted RBP7.74□□□□□ -1.17
LMO3-209ENST00000447609 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
LMO3-209ENST00000447609 KIF21BO75037 1637 aa7.73□□□□□ -1.17
LMO3-209ENST00000447609 UACAQ9BZF9 1416 aa7.72□□□□□ -1.17
LMO3-209ENST00000447609 TSPY4P0CV99 314 aa7.72□□□□□ -1.17
LMO3-209ENST00000447609 TSPY10P0CW01 314 aa7.72□□□□□ -1.17
LMO3-209ENST00000447609 ARHGEF11O15085 1522 aa7.71□□□□□ -1.18
LMO3-209ENST00000447609 EFCAB2Q5VUJ9 269 aa7.7□□□□□ -1.18
LMO3-209ENST00000447609 RNF39Q9H2S5 420 aa7.7□□□□□ -1.18
LMO3-209ENST00000447609 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
LMO3-209ENST00000447609 CCNB3Q8WWL7 1395 aa7.7□□□□□ -1.18
LMO3-209ENST00000447609 PLB1Q6P1J6 1458 aa7.68□□□□□ -1.18
LMO3-209ENST00000447609 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
LMO3-209ENST00000447609 VPS8Q8N3P4 1428 aa7.68□□□□□ -1.18
LMO3-209ENST00000447609 ARHGAP35Q9NRY4 1499 aa7.67□□□□□ -1.18
LMO3-209ENST00000447609 MLECQ14165 292 aa7.67□□□□□ -1.18
LMO3-209ENST00000447609 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
LMO3-209ENST00000447609 EFCAB5A4FU69 1503 aa7.66□□□□□ -1.18
LMO3-209ENST00000447609 C1QBPQ07021 282 aaKnown RBP7.64□□□□□ -1.19
LMO3-209ENST00000447609 CCDC18Q5T9S5 1454 aa7.64□□□□□ -1.19
LMO3-209ENST00000447609 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
LMO3-209ENST00000447609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.64□□□□□ -1.19
LMO3-209ENST00000447609 UGGT2Q9NYU1 1516 aa7.64□□□□□ -1.19
LMO3-209ENST00000447609 CTTNBP2Q8WZ74 1663 aa7.63□□□□□ -1.19
LMO3-209ENST00000447609 ARAP1Q96P48 1450 aa7.63□□□□□ -1.19
LMO3-209ENST00000447609 HNRNPMP52272 730 aaKnown RBP eCLIP7.62□□□□□ -1.19
LMO3-209ENST00000447609 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms