RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 A0A0G2JS52 829 aa24.07■■□□□ 1.44
ATG9A-215ENST00000446716 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
ATG9A-215ENST00000446716 WDR43Q15061 677 aaKnown RBP eCLIP24.05■■□□□ 1.44
ATG9A-215ENST00000446716 RGL3Q3MIN7 710 aa24.05■■□□□ 1.44
ATG9A-215ENST00000446716 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
ATG9A-215ENST00000446716 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
ATG9A-215ENST00000446716 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
ATG9A-215ENST00000446716 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
ATG9A-215ENST00000446716 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
ATG9A-215ENST00000446716 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.43
ATG9A-215ENST00000446716 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
ATG9A-215ENST00000446716 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.43
ATG9A-215ENST00000446716 HAP1P54257 671 aaPredicted RBP23.93■■□□□ 1.42
ATG9A-215ENST00000446716 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
ATG9A-215ENST00000446716 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
ATG9A-215ENST00000446716 CUX2O14529 1486 aa23.88■■□□□ 1.41
ATG9A-215ENST00000446716 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
ATG9A-215ENST00000446716 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
ATG9A-215ENST00000446716 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.85■■□□□ 1.41
ATG9A-215ENST00000446716 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.41
ATG9A-215ENST00000446716 ANP32AP39687 249 aaKnown RBP23.83■■□□□ 1.41
ATG9A-215ENST00000446716 EIF4G1Q04637 1599 aaKnown RBP23.83■■□□□ 1.41
ATG9A-215ENST00000446716 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
ATG9A-215ENST00000446716 FKBP8Q14318 412 aa23.79■■□□□ 1.4
ATG9A-215ENST00000446716 CDCA8Q53HL2 280 aa23.79■■□□□ 1.4
ATG9A-215ENST00000446716 MLECQ14165 292 aa23.78■■□□□ 1.4
ATG9A-215ENST00000446716 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
ATG9A-215ENST00000446716 UPF2Q9HAU5 1272 aaKnown RBP23.77■■□□□ 1.4
ATG9A-215ENST00000446716 POGKQ9P215 609 aa23.76■■□□□ 1.39
ATG9A-215ENST00000446716 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
ATG9A-215ENST00000446716 LMOD2Q6P5Q4 547 aa23.74■■□□□ 1.39
ATG9A-215ENST00000446716 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
ATG9A-215ENST00000446716 CFAP53Q96M91 514 aa23.72■■□□□ 1.39
ATG9A-215ENST00000446716 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
ATG9A-215ENST00000446716 KNSTRNQ9Y448 316 aa23.7■■□□□ 1.38
ATG9A-215ENST00000446716 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
ATG9A-215ENST00000446716 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
ATG9A-215ENST00000446716 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
ATG9A-215ENST00000446716 CCDC136Q96JN2 1154 aa23.66■■□□□ 1.38
ATG9A-215ENST00000446716 MYH16Q9H6N6 1097 aa23.66■■□□□ 1.38
ATG9A-215ENST00000446716 KANK1Q14678 1352 aa23.65■■□□□ 1.38
ATG9A-215ENST00000446716 SOGA1O94964 1423 aa23.65■■□□□ 1.38
ATG9A-215ENST00000446716 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
ATG9A-215ENST00000446716 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
ATG9A-215ENST00000446716 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
ATG9A-215ENST00000446716 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
ATG9A-215ENST00000446716 GGT6Q6P531 493 aa23.6■■□□□ 1.37
ATG9A-215ENST00000446716 ARXQ96QS3 562 aa23.59■■□□□ 1.37
ATG9A-215ENST00000446716 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
ATG9A-215ENST00000446716 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
ATG9A-215ENST00000446716 EFCAB2Q5VUJ9 269 aa23.5■■□□□ 1.35
ATG9A-215ENST00000446716 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
ATG9A-215ENST00000446716 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
ATG9A-215ENST00000446716 MIER1Q8N108 512 aa23.49■■□□□ 1.35
ATG9A-215ENST00000446716 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
ATG9A-215ENST00000446716 TNNT2P45379 298 aaPredicted RBP23.46■■□□□ 1.35
ATG9A-215ENST00000446716 NEUROD2Q15784 382 aa23.45■■□□□ 1.34
ATG9A-215ENST00000446716 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
ATG9A-215ENST00000446716 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
ATG9A-215ENST00000446716 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
ATG9A-215ENST00000446716 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
ATG9A-215ENST00000446716 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
ATG9A-215ENST00000446716 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.34
ATG9A-215ENST00000446716 TMF1P82094 1093 aa23.39■■□□□ 1.33
ATG9A-215ENST00000446716 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
ATG9A-215ENST00000446716 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
ATG9A-215ENST00000446716 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
ATG9A-215ENST00000446716 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
ATG9A-215ENST00000446716 SOX12O15370 315 aa23.36■■□□□ 1.33
ATG9A-215ENST00000446716 PKD2Q13563 968 aa23.35■■□□□ 1.33
ATG9A-215ENST00000446716 CC2D1BQ5T0F9 858 aaKnown RBP23.34■■□□□ 1.33
ATG9A-215ENST00000446716 NPHP1O15259 732 aa23.34■■□□□ 1.33
ATG9A-215ENST00000446716 STK26Q9P289 416 aa23.33■■□□□ 1.33
ATG9A-215ENST00000446716 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
ATG9A-215ENST00000446716 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
ATG9A-215ENST00000446716 FTSJ3Q8IY81 847 aaKnown RBP23.31■■□□□ 1.32
ATG9A-215ENST00000446716 KIF3BO15066 747 aa23.28■■□□□ 1.32
ATG9A-215ENST00000446716 KANK4Q5T7N3 995 aaPredicted RBP23.28■■□□□ 1.32
ATG9A-215ENST00000446716 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
ATG9A-215ENST00000446716 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
ATG9A-215ENST00000446716 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
ATG9A-215ENST00000446716 NUP155O75694 1391 aa23.24■■□□□ 1.31
ATG9A-215ENST00000446716 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
ATG9A-215ENST00000446716 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
ATG9A-215ENST00000446716 FOXD1Q16676 465 aa23.22■■□□□ 1.31
ATG9A-215ENST00000446716 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
ATG9A-215ENST00000446716 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
ATG9A-215ENST00000446716 HNRNPMP52272 730 aaKnown RBP eCLIP23.21■■□□□ 1.31
ATG9A-215ENST00000446716 TIMELESSQ9UNS1 1208 aa23.2■■□□□ 1.31
ATG9A-215ENST00000446716 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
ATG9A-215ENST00000446716 RAPGEF2Q9Y4G8 1499 aa23.2■■□□□ 1.3
ATG9A-215ENST00000446716 HDGFL2Q7Z4V5 671 aaPredicted RBP23.19■■□□□ 1.3
ATG9A-215ENST00000446716 WIZO95785 1651 aa23.18■■□□□ 1.3
ATG9A-215ENST00000446716 PAK3O75914 559 aaPredicted RBP23.17■■□□□ 1.3
ATG9A-215ENST00000446716 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
ATG9A-215ENST00000446716 FRAT1Q92837 279 aaPredicted RBP23.17■■□□□ 1.3
ATG9A-215ENST00000446716 WASHC2CQ9Y4E1 1318 aa23.16■■□□□ 1.3
ATG9A-215ENST00000446716 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
ATG9A-215ENST00000446716 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
ATG9A-215ENST00000446716 FHOD3Q2V2M9 1422 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms