RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
HCFC1-203ENST00000444191 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
HCFC1-203ENST00000444191 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
HCFC1-203ENST00000444191 KIF21BO75037 1637 aa16.2■□□□□ 0.18
HCFC1-203ENST00000444191 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
HCFC1-203ENST00000444191 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
HCFC1-203ENST00000444191 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
HCFC1-203ENST00000444191 CUX2O14529 1486 aa16.11■□□□□ 0.17
HCFC1-203ENST00000444191 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
HCFC1-203ENST00000444191 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-203ENST00000444191 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
HCFC1-203ENST00000444191 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
HCFC1-203ENST00000444191 FOXD1Q16676 465 aa16.09■□□□□ 0.17
HCFC1-203ENST00000444191 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
HCFC1-203ENST00000444191 NBR1Q14596 966 aa16.08■□□□□ 0.16
HCFC1-203ENST00000444191 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
HCFC1-203ENST00000444191 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-203ENST00000444191 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
HCFC1-203ENST00000444191 ZNF777Q9ULD5 760 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-203ENST00000444191 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
HCFC1-203ENST00000444191 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
HCFC1-203ENST00000444191 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
HCFC1-203ENST00000444191 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
HCFC1-203ENST00000444191 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
HCFC1-203ENST00000444191 FBLN2P98095 1184 aa15.95■□□□□ 0.14
HCFC1-203ENST00000444191 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
HCFC1-203ENST00000444191 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
HCFC1-203ENST00000444191 KDM2AQ9Y2K7 1162 aa15.92■□□□□ 0.14
HCFC1-203ENST00000444191 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
HCFC1-203ENST00000444191 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
HCFC1-203ENST00000444191 IGF1RP08069 1367 aa15.91■□□□□ 0.14
HCFC1-203ENST00000444191 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
HCFC1-203ENST00000444191 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-203ENST00000444191 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
HCFC1-203ENST00000444191 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
HCFC1-203ENST00000444191 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-203ENST00000444191 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
HCFC1-203ENST00000444191 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
HCFC1-203ENST00000444191 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
HCFC1-203ENST00000444191 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
HCFC1-203ENST00000444191 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
HCFC1-203ENST00000444191 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.13
HCFC1-203ENST00000444191 PPP4R2Q9NY27 417 aa15.83■□□□□ 0.12
HCFC1-203ENST00000444191 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
HCFC1-203ENST00000444191 CUX1P39880 1505 aa15.81■□□□□ 0.12
HCFC1-203ENST00000444191 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
HCFC1-203ENST00000444191 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
HCFC1-203ENST00000444191 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
HCFC1-203ENST00000444191 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
HCFC1-203ENST00000444191 MSH5O43196 834 aa15.77■□□□□ 0.11
HCFC1-203ENST00000444191 WASHC2AQ641Q2 1341 aa15.76■□□□□ 0.11
HCFC1-203ENST00000444191 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
HCFC1-203ENST00000444191 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
HCFC1-203ENST00000444191 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-203ENST00000444191 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
HCFC1-203ENST00000444191 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
HCFC1-203ENST00000444191 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
HCFC1-203ENST00000444191 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
HCFC1-203ENST00000444191 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
HCFC1-203ENST00000444191 MAPKBP1O60336 1514 aa15.71■□□□□ 0.11
HCFC1-203ENST00000444191 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
HCFC1-203ENST00000444191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
HCFC1-203ENST00000444191 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
HCFC1-203ENST00000444191 RTN4Q9NQC3 1192 aaKnown RBP15.7■□□□□ 0.1
HCFC1-203ENST00000444191 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
HCFC1-203ENST00000444191 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
HCFC1-203ENST00000444191 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
HCFC1-203ENST00000444191 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-203ENST00000444191 TIAM1Q13009 1591 aa15.66■□□□□ 0.1
HCFC1-203ENST00000444191 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
HCFC1-203ENST00000444191 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-203ENST00000444191 CARD11Q9BXL7 1154 aa15.65■□□□□ 0.1
HCFC1-203ENST00000444191 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-203ENST00000444191 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
HCFC1-203ENST00000444191 CFTRP13569 1480 aa15.61■□□□□ 0.09
HCFC1-203ENST00000444191 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
HCFC1-203ENST00000444191 PKD2Q13563 968 aa15.6■□□□□ 0.09
HCFC1-203ENST00000444191 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
HCFC1-203ENST00000444191 CC2D1BQ5T0F9 858 aaKnown RBP15.6■□□□□ 0.09
HCFC1-203ENST00000444191 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-203ENST00000444191 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.09
HCFC1-203ENST00000444191 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.09
HCFC1-203ENST00000444191 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
HCFC1-203ENST00000444191 FANCD2Q9BXW9 1451 aa15.58■□□□□ 0.08
HCFC1-203ENST00000444191 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
HCFC1-203ENST00000444191 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
HCFC1-203ENST00000444191 PCF11O94913 1555 aaKnown RBP15.54■□□□□ 0.08
HCFC1-203ENST00000444191 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
HCFC1-203ENST00000444191 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
HCFC1-203ENST00000444191 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
HCFC1-203ENST00000444191 CCDC7Q96M83 1385 aa15.53■□□□□ 0.08
HCFC1-203ENST00000444191 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
HCFC1-203ENST00000444191 NESP48681 1621 aa15.53■□□□□ 0.08
HCFC1-203ENST00000444191 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
HCFC1-203ENST00000444191 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
HCFC1-203ENST00000444191 PLIN1O60240 522 aa15.53■□□□□ 0.08
HCFC1-203ENST00000444191 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
HCFC1-203ENST00000444191 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.08
HCFC1-203ENST00000444191 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
HCFC1-203ENST00000444191 NEFMP07197 916 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms