RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
NLE1-202ENST00000442241 FHOD3Q2V2M9 1422 aa23.69■■□□□ 1.38
NLE1-202ENST00000442241 GTF3C3Q9Y5Q9 886 aa23.69■■□□□ 1.38
NLE1-202ENST00000442241 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
NLE1-202ENST00000442241 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
NLE1-202ENST00000442241 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
NLE1-202ENST00000442241 TIAM1Q13009 1591 aa23.65■■□□□ 1.38
NLE1-202ENST00000442241 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
NLE1-202ENST00000442241 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
NLE1-202ENST00000442241 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
NLE1-202ENST00000442241 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
NLE1-202ENST00000442241 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.37
NLE1-202ENST00000442241 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
NLE1-202ENST00000442241 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
NLE1-202ENST00000442241 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
NLE1-202ENST00000442241 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
NLE1-202ENST00000442241 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
NLE1-202ENST00000442241 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
NLE1-202ENST00000442241 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
NLE1-202ENST00000442241 CUL7Q14999 1698 aa23.43■■□□□ 1.34
NLE1-202ENST00000442241 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
NLE1-202ENST00000442241 CTTNBP2Q8WZ74 1663 aa23.42■■□□□ 1.34
NLE1-202ENST00000442241 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
NLE1-202ENST00000442241 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
NLE1-202ENST00000442241 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
NLE1-202ENST00000442241 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
NLE1-202ENST00000442241 ARID3CA6NKF2 412 aa23.39■■□□□ 1.34
NLE1-202ENST00000442241 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
NLE1-202ENST00000442241 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
NLE1-202ENST00000442241 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
NLE1-202ENST00000442241 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
NLE1-202ENST00000442241 EFCAB5A4FU69 1503 aa23.34■■□□□ 1.33
NLE1-202ENST00000442241 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.322e-6■■■■■ 33.8
NLE1-202ENST00000442241 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
NLE1-202ENST00000442241 FMN1Q68DA7 1419 aa23.29■■□□□ 1.32
NLE1-202ENST00000442241 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
NLE1-202ENST00000442241 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
NLE1-202ENST00000442241 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
NLE1-202ENST00000442241 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
NLE1-202ENST00000442241 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
NLE1-202ENST00000442241 PTPRKQ15262 1439 aa23.2■■□□□ 1.3
NLE1-202ENST00000442241 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
NLE1-202ENST00000442241 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
NLE1-202ENST00000442241 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
NLE1-202ENST00000442241 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
NLE1-202ENST00000442241 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
NLE1-202ENST00000442241 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
NLE1-202ENST00000442241 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
NLE1-202ENST00000442241 RRP7BPQ9NSQ0 103 aa23.12■■□□□ 1.29
NLE1-202ENST00000442241 MAGI3Q5TCQ9 1506 aa23.12■■□□□ 1.29
NLE1-202ENST00000442241 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
NLE1-202ENST00000442241 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.28
NLE1-202ENST00000442241 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
NLE1-202ENST00000442241 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
NLE1-202ENST00000442241 CDK13Q14004 1512 aaKnown RBP23.05■■□□□ 1.28
NLE1-202ENST00000442241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.03■■□□□ 1.28
NLE1-202ENST00000442241 ADAMTS12P58397 1594 aa23.02■■□□□ 1.28
NLE1-202ENST00000442241 IQGAP2Q13576 1575 aa23.02■■□□□ 1.28
NLE1-202ENST00000442241 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
NLE1-202ENST00000442241 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
NLE1-202ENST00000442241 EHBP1L1Q8N3D4 1523 aa22.99■■□□□ 1.27
NLE1-202ENST00000442241 PTPN23Q9H3S7 1636 aa22.99■■□□□ 1.27
NLE1-202ENST00000442241 FBLN2P98095 1184 aa22.98■■□□□ 1.27
NLE1-202ENST00000442241 NAIPQ13075 1403 aa22.98■■□□□ 1.27
NLE1-202ENST00000442241 HFM1A2PYH4 1435 aa22.97■■□□□ 1.27
NLE1-202ENST00000442241 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
NLE1-202ENST00000442241 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
NLE1-202ENST00000442241 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
NLE1-202ENST00000442241 TONSLQ96HA7 1378 aa22.96■■□□□ 1.27
NLE1-202ENST00000442241 FOXD1Q16676 465 aa22.93■■□□□ 1.26
NLE1-202ENST00000442241 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
NLE1-202ENST00000442241 HECW1Q76N89 1606 aa22.91■■□□□ 1.26
NLE1-202ENST00000442241 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
NLE1-202ENST00000442241 ZNF644Q9H582 1327 aaPredicted RBP22.9■■□□□ 1.26
NLE1-202ENST00000442241 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
NLE1-202ENST00000442241 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
NLE1-202ENST00000442241 KDM6BO15054 1643 aa22.88■■□□□ 1.25
NLE1-202ENST00000442241 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
NLE1-202ENST00000442241 WDR62O43379 1518 aa22.86■■□□□ 1.25
NLE1-202ENST00000442241 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
NLE1-202ENST00000442241 TIMELESSQ9UNS1 1208 aa22.84■■□□□ 1.25
NLE1-202ENST00000442241 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.24
NLE1-202ENST00000442241 DISP1Q96F81 1524 aa22.83■■□□□ 1.24
NLE1-202ENST00000442241 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
NLE1-202ENST00000442241 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
NLE1-202ENST00000442241 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
NLE1-202ENST00000442241 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
NLE1-202ENST00000442241 DENND4BO75064 1496 aaPredicted RBP22.77■■□□□ 1.23
NLE1-202ENST00000442241 TCOF1Q13428 1488 aaKnown RBP22.77■■□□□ 1.23
NLE1-202ENST00000442241 NUP153P49790 1475 aaKnown RBP22.76■■□□□ 1.23
NLE1-202ENST00000442241 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
NLE1-202ENST00000442241 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
NLE1-202ENST00000442241 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
NLE1-202ENST00000442241 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
NLE1-202ENST00000442241 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
NLE1-202ENST00000442241 ANP32CO43423 234 aa22.69■■□□□ 1.22
NLE1-202ENST00000442241 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
NLE1-202ENST00000442241 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
NLE1-202ENST00000442241 MIA2Q96PC5 1412 aa22.68■■□□□ 1.22
NLE1-202ENST00000442241 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms