RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.36
BRPF3-203ENST00000441123 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
BRPF3-203ENST00000441123 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
BRPF3-203ENST00000441123 CCDC136Q96JN2 1154 aa17.29■□□□□ 0.36
BRPF3-203ENST00000441123 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
BRPF3-203ENST00000441123 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
BRPF3-203ENST00000441123 WIZO95785 1651 aa17.26■□□□□ 0.35
BRPF3-203ENST00000441123 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
BRPF3-203ENST00000441123 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
BRPF3-203ENST00000441123 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
BRPF3-203ENST00000441123 CUX2O14529 1486 aa17.24■□□□□ 0.35
BRPF3-203ENST00000441123 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
BRPF3-203ENST00000441123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.347e-7■□□□□ 9.8
BRPF3-203ENST00000441123 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
BRPF3-203ENST00000441123 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
BRPF3-203ENST00000441123 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
BRPF3-203ENST00000441123 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
BRPF3-203ENST00000441123 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
BRPF3-203ENST00000441123 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
BRPF3-203ENST00000441123 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
BRPF3-203ENST00000441123 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
BRPF3-203ENST00000441123 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
BRPF3-203ENST00000441123 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
BRPF3-203ENST00000441123 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
BRPF3-203ENST00000441123 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
BRPF3-203ENST00000441123 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
BRPF3-203ENST00000441123 DDRGK1Q96HY6 314 aa17.09■□□□□ 0.33
BRPF3-203ENST00000441123 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
BRPF3-203ENST00000441123 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
BRPF3-203ENST00000441123 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
BRPF3-203ENST00000441123 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
BRPF3-203ENST00000441123 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
BRPF3-203ENST00000441123 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
BRPF3-203ENST00000441123 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
BRPF3-203ENST00000441123 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
BRPF3-203ENST00000441123 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.31
BRPF3-203ENST00000441123 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
BRPF3-203ENST00000441123 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
BRPF3-203ENST00000441123 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
BRPF3-203ENST00000441123 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
BRPF3-203ENST00000441123 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
BRPF3-203ENST00000441123 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
BRPF3-203ENST00000441123 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
BRPF3-203ENST00000441123 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
BRPF3-203ENST00000441123 BECN1Q14457 450 aa16.95■□□□□ 0.3
BRPF3-203ENST00000441123 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
BRPF3-203ENST00000441123 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
BRPF3-203ENST00000441123 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
BRPF3-203ENST00000441123 NBR1Q14596 966 aa16.93■□□□□ 0.3
BRPF3-203ENST00000441123 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
BRPF3-203ENST00000441123 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
BRPF3-203ENST00000441123 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
BRPF3-203ENST00000441123 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
BRPF3-203ENST00000441123 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
BRPF3-203ENST00000441123 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
BRPF3-203ENST00000441123 TMF1P82094 1093 aa16.86■□□□□ 0.29
BRPF3-203ENST00000441123 KANK1Q14678 1352 aa16.86■□□□□ 0.29
BRPF3-203ENST00000441123 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
BRPF3-203ENST00000441123 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
BRPF3-203ENST00000441123 DHX57Q6P158 1386 aaKnown RBP16.81■□□□□ 0.28
BRPF3-203ENST00000441123 ANKRD30AQ9BXX3 1397 aa16.81■□□□□ 0.28
BRPF3-203ENST00000441123 MS4A1P11836 297 aa16.81■□□□□ 0.28
BRPF3-203ENST00000441123 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
BRPF3-203ENST00000441123 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
BRPF3-203ENST00000441123 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
BRPF3-203ENST00000441123 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
BRPF3-203ENST00000441123 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
BRPF3-203ENST00000441123 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
BRPF3-203ENST00000441123 KIF21BO75037 1637 aa16.77■□□□□ 0.28
BRPF3-203ENST00000441123 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
BRPF3-203ENST00000441123 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.28
BRPF3-203ENST00000441123 RALBP1Q15311 655 aa16.77■□□□□ 0.27
BRPF3-203ENST00000441123 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.27
BRPF3-203ENST00000441123 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
BRPF3-203ENST00000441123 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
BRPF3-203ENST00000441123 PKD2Q13563 968 aa16.75■□□□□ 0.27
BRPF3-203ENST00000441123 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
BRPF3-203ENST00000441123 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
BRPF3-203ENST00000441123 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
BRPF3-203ENST00000441123 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
BRPF3-203ENST00000441123 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
BRPF3-203ENST00000441123 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
BRPF3-203ENST00000441123 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
BRPF3-203ENST00000441123 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
BRPF3-203ENST00000441123 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
BRPF3-203ENST00000441123 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
BRPF3-203ENST00000441123 CUX1P39880 1505 aa16.68■□□□□ 0.26
BRPF3-203ENST00000441123 NUP155O75694 1391 aa16.68■□□□□ 0.26
BRPF3-203ENST00000441123 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
BRPF3-203ENST00000441123 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
BRPF3-203ENST00000441123 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
BRPF3-203ENST00000441123 POGKQ9P215 609 aa16.65■□□□□ 0.26
BRPF3-203ENST00000441123 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
BRPF3-203ENST00000441123 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
BRPF3-203ENST00000441123 A0A0G2JS52 829 aa16.62■□□□□ 0.25
BRPF3-203ENST00000441123 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms