RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 IGF1RP08069 1367 aa17.55■□□□□ 0.4
PCGF3-207ENST00000440452 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
PCGF3-207ENST00000440452 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
PCGF3-207ENST00000440452 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
PCGF3-207ENST00000440452 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
PCGF3-207ENST00000440452 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
PCGF3-207ENST00000440452 RBM19Q9Y4C8 960 aaKnown RBP17.5■□□□□ 0.39
PCGF3-207ENST00000440452 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
PCGF3-207ENST00000440452 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
PCGF3-207ENST00000440452 CFTRP13569 1480 aa17.46■□□□□ 0.39
PCGF3-207ENST00000440452 PHLDB1Q86UU1 1377 aa17.46■□□□□ 0.39
PCGF3-207ENST00000440452 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
PCGF3-207ENST00000440452 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
PCGF3-207ENST00000440452 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
PCGF3-207ENST00000440452 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
PCGF3-207ENST00000440452 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
PCGF3-207ENST00000440452 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
PCGF3-207ENST00000440452 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
PCGF3-207ENST00000440452 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
PCGF3-207ENST00000440452 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
PCGF3-207ENST00000440452 ANP32CO43423 234 aa17.4■□□□□ 0.38
PCGF3-207ENST00000440452 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.37
PCGF3-207ENST00000440452 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
PCGF3-207ENST00000440452 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
PCGF3-207ENST00000440452 NBR1Q14596 966 aa17.36■□□□□ 0.37
PCGF3-207ENST00000440452 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
PCGF3-207ENST00000440452 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
PCGF3-207ENST00000440452 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
PCGF3-207ENST00000440452 NESP48681 1621 aa17.34■□□□□ 0.37
PCGF3-207ENST00000440452 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
PCGF3-207ENST00000440452 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
PCGF3-207ENST00000440452 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
PCGF3-207ENST00000440452 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
PCGF3-207ENST00000440452 FOXD1Q16676 465 aa17.3■□□□□ 0.36
PCGF3-207ENST00000440452 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
PCGF3-207ENST00000440452 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
PCGF3-207ENST00000440452 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
PCGF3-207ENST00000440452 FBLN2P98095 1184 aa17.25■□□□□ 0.35
PCGF3-207ENST00000440452 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCGF3-207ENST00000440452 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
PCGF3-207ENST00000440452 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
PCGF3-207ENST00000440452 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
PCGF3-207ENST00000440452 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
PCGF3-207ENST00000440452 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
PCGF3-207ENST00000440452 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
PCGF3-207ENST00000440452 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
PCGF3-207ENST00000440452 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
PCGF3-207ENST00000440452 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
PCGF3-207ENST00000440452 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
PCGF3-207ENST00000440452 MSH5O43196 834 aa17.16■□□□□ 0.34
PCGF3-207ENST00000440452 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
PCGF3-207ENST00000440452 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
PCGF3-207ENST00000440452 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
PCGF3-207ENST00000440452 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
PCGF3-207ENST00000440452 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
PCGF3-207ENST00000440452 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
PCGF3-207ENST00000440452 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
PCGF3-207ENST00000440452 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
PCGF3-207ENST00000440452 CASKIN1Q8WXD9 1431 aa17.06■□□□□ 0.32
PCGF3-207ENST00000440452 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■■■■■ 28.1
PCGF3-207ENST00000440452 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
PCGF3-207ENST00000440452 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
PCGF3-207ENST00000440452 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
PCGF3-207ENST00000440452 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
PCGF3-207ENST00000440452 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
PCGF3-207ENST00000440452 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
PCGF3-207ENST00000440452 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
PCGF3-207ENST00000440452 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
PCGF3-207ENST00000440452 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.31
PCGF3-207ENST00000440452 MRS2Q9HD23 443 aa17.02■□□□□ 0.31
PCGF3-207ENST00000440452 B4GALNT3Q6L9W6 998 aa17.01■□□□□ 0.31
PCGF3-207ENST00000440452 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
PCGF3-207ENST00000440452 NCOA2Q15596 1464 aa17■□□□□ 0.31
PCGF3-207ENST00000440452 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
PCGF3-207ENST00000440452 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.313e-10■■■■■ 32.7
PCGF3-207ENST00000440452 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
PCGF3-207ENST00000440452 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
PCGF3-207ENST00000440452 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
PCGF3-207ENST00000440452 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
PCGF3-207ENST00000440452 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
PCGF3-207ENST00000440452 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
PCGF3-207ENST00000440452 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
PCGF3-207ENST00000440452 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
PCGF3-207ENST00000440452 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
PCGF3-207ENST00000440452 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
PCGF3-207ENST00000440452 SALL2Q9Y467 1007 aaPredicted RBP16.94■□□□□ 0.3
PCGF3-207ENST00000440452 NAIPQ13075 1403 aa16.94■□□□□ 0.3
PCGF3-207ENST00000440452 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
PCGF3-207ENST00000440452 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
PCGF3-207ENST00000440452 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
PCGF3-207ENST00000440452 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
PCGF3-207ENST00000440452 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
PCGF3-207ENST00000440452 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
PCGF3-207ENST00000440452 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
PCGF3-207ENST00000440452 C11orf95C9JLR9 678 aaPredicted RBP16.9■□□□□ 0.3
PCGF3-207ENST00000440452 EFCAB5A4FU69 1503 aa16.88■□□□□ 0.29
PCGF3-207ENST00000440452 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
PCGF3-207ENST00000440452 CDK13Q14004 1512 aaKnown RBP16.87■□□□□ 0.29
PCGF3-207ENST00000440452 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
PCGF3-207ENST00000440452 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms