RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
HDAC8-214ENST00000439122 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
HDAC8-214ENST00000439122 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-214ENST00000439122 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
HDAC8-214ENST00000439122 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
HDAC8-214ENST00000439122 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
HDAC8-214ENST00000439122 PCF11O94913 1555 aaKnown RBP17.87■□□□□ 0.45
HDAC8-214ENST00000439122 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
HDAC8-214ENST00000439122 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
HDAC8-214ENST00000439122 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
HDAC8-214ENST00000439122 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
HDAC8-214ENST00000439122 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
HDAC8-214ENST00000439122 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
HDAC8-214ENST00000439122 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
HDAC8-214ENST00000439122 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
HDAC8-214ENST00000439122 GAPVD1Q14C86 1478 aa17.81■□□□□ 0.44
HDAC8-214ENST00000439122 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
HDAC8-214ENST00000439122 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
HDAC8-214ENST00000439122 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
HDAC8-214ENST00000439122 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
HDAC8-214ENST00000439122 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
HDAC8-214ENST00000439122 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
HDAC8-214ENST00000439122 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.44
HDAC8-214ENST00000439122 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
HDAC8-214ENST00000439122 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
HDAC8-214ENST00000439122 MIER1Q8N108 512 aa17.75■□□□□ 0.43
HDAC8-214ENST00000439122 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
HDAC8-214ENST00000439122 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
HDAC8-214ENST00000439122 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
HDAC8-214ENST00000439122 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
HDAC8-214ENST00000439122 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
HDAC8-214ENST00000439122 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
HDAC8-214ENST00000439122 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
HDAC8-214ENST00000439122 GTF3C3Q9Y5Q9 886 aa17.63■□□□□ 0.41
HDAC8-214ENST00000439122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
HDAC8-214ENST00000439122 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
HDAC8-214ENST00000439122 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
HDAC8-214ENST00000439122 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
HDAC8-214ENST00000439122 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
HDAC8-214ENST00000439122 LRRIQ1Q96JM4 1722 aa17.59■□□□□ 0.41
HDAC8-214ENST00000439122 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
HDAC8-214ENST00000439122 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
HDAC8-214ENST00000439122 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
HDAC8-214ENST00000439122 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
HDAC8-214ENST00000439122 IQGAP2Q13576 1575 aa17.52■□□□□ 0.4
HDAC8-214ENST00000439122 MYOM3Q5VTT5 1437 aa17.51■□□□□ 0.39
HDAC8-214ENST00000439122 SUPT6HQ7KZ85 1726 aaKnown RBP17.51■□□□□ 0.39
HDAC8-214ENST00000439122 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
HDAC8-214ENST00000439122 CCDC18Q5T9S5 1454 aa17.49■□□□□ 0.39
HDAC8-214ENST00000439122 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
HDAC8-214ENST00000439122 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
HDAC8-214ENST00000439122 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
HDAC8-214ENST00000439122 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
HDAC8-214ENST00000439122 MAGI3Q5TCQ9 1506 aa17.46■□□□□ 0.39
HDAC8-214ENST00000439122 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
HDAC8-214ENST00000439122 WDR62O43379 1518 aa17.45■□□□□ 0.38
HDAC8-214ENST00000439122 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
HDAC8-214ENST00000439122 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
HDAC8-214ENST00000439122 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
HDAC8-214ENST00000439122 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
HDAC8-214ENST00000439122 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
HDAC8-214ENST00000439122 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
HDAC8-214ENST00000439122 NAIPQ13075 1403 aa17.4■□□□□ 0.38
HDAC8-214ENST00000439122 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
HDAC8-214ENST00000439122 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
HDAC8-214ENST00000439122 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
HDAC8-214ENST00000439122 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
HDAC8-214ENST00000439122 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
HDAC8-214ENST00000439122 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
HDAC8-214ENST00000439122 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
HDAC8-214ENST00000439122 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
HDAC8-214ENST00000439122 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
HDAC8-214ENST00000439122 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
HDAC8-214ENST00000439122 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
HDAC8-214ENST00000439122 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
HDAC8-214ENST00000439122 DISP1Q96F81 1524 aa17.33■□□□□ 0.36
HDAC8-214ENST00000439122 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
HDAC8-214ENST00000439122 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
HDAC8-214ENST00000439122 DDX10Q13206 875 aaKnown RBP17.31■□□□□ 0.36
HDAC8-214ENST00000439122 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-214ENST00000439122 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-214ENST00000439122 FBLN2P98095 1184 aa17.27■□□□□ 0.35
HDAC8-214ENST00000439122 TRIM52Q96A61 297 aa17.27■□□□□ 0.35
HDAC8-214ENST00000439122 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
HDAC8-214ENST00000439122 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
HDAC8-214ENST00000439122 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
HDAC8-214ENST00000439122 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
HDAC8-214ENST00000439122 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-214ENST00000439122 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
HDAC8-214ENST00000439122 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
HDAC8-214ENST00000439122 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
HDAC8-214ENST00000439122 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
HDAC8-214ENST00000439122 KDM6BO15054 1643 aa17.22■□□□□ 0.35
HDAC8-214ENST00000439122 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-214ENST00000439122 DAPK1P53355 1430 aa17.19■□□□□ 0.34
HDAC8-214ENST00000439122 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
HDAC8-214ENST00000439122 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
HDAC8-214ENST00000439122 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
HDAC8-214ENST00000439122 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
HDAC8-214ENST00000439122 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms