RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
HCG18-236ENST00000438412 WDR97A6NE52 1622 aa18.89■□□□□ 0.61
HCG18-236ENST00000438412 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
HCG18-236ENST00000438412 PHLDB1Q86UU1 1377 aa18.87■□□□□ 0.61
HCG18-236ENST00000438412 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
HCG18-236ENST00000438412 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
HCG18-236ENST00000438412 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
HCG18-236ENST00000438412 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.6
HCG18-236ENST00000438412 CUL7Q14999 1698 aa18.83■□□□□ 0.6
HCG18-236ENST00000438412 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.6
HCG18-236ENST00000438412 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
HCG18-236ENST00000438412 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
HCG18-236ENST00000438412 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
HCG18-236ENST00000438412 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
HCG18-236ENST00000438412 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
HCG18-236ENST00000438412 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
HCG18-236ENST00000438412 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
HCG18-236ENST00000438412 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
HCG18-236ENST00000438412 MAP3K1Q13233 1512 aa18.72■□□□□ 0.59
HCG18-236ENST00000438412 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
HCG18-236ENST00000438412 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
HCG18-236ENST00000438412 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
HCG18-236ENST00000438412 MIER1Q8N108 512 aa18.71■□□□□ 0.59
HCG18-236ENST00000438412 LRRIQ1Q96JM4 1722 aa18.7■□□□□ 0.58
HCG18-236ENST00000438412 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
HCG18-236ENST00000438412 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
HCG18-236ENST00000438412 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
HCG18-236ENST00000438412 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
HCG18-236ENST00000438412 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
HCG18-236ENST00000438412 SAMD9Q5K651 1589 aa18.64■□□□□ 0.57
HCG18-236ENST00000438412 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
HCG18-236ENST00000438412 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
HCG18-236ENST00000438412 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
HCG18-236ENST00000438412 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
HCG18-236ENST00000438412 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
HCG18-236ENST00000438412 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
HCG18-236ENST00000438412 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
HCG18-236ENST00000438412 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
HCG18-236ENST00000438412 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
HCG18-236ENST00000438412 MAGI3Q5TCQ9 1506 aa18.56■□□□□ 0.56
HCG18-236ENST00000438412 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
HCG18-236ENST00000438412 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
HCG18-236ENST00000438412 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
HCG18-236ENST00000438412 NCOA2Q15596 1464 aa18.52■□□□□ 0.56
HCG18-236ENST00000438412 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
HCG18-236ENST00000438412 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
HCG18-236ENST00000438412 GTF3C3Q9Y5Q9 886 aa18.49■□□□□ 0.55
HCG18-236ENST00000438412 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
HCG18-236ENST00000438412 WDR62O43379 1518 aa18.47■□□□□ 0.55
HCG18-236ENST00000438412 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
HCG18-236ENST00000438412 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
HCG18-236ENST00000438412 FBLN2P98095 1184 aa18.45■□□□□ 0.54
HCG18-236ENST00000438412 HIRIP3Q9BW71 556 aaPredicted RBP18.45■□□□□ 0.54
HCG18-236ENST00000438412 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
HCG18-236ENST00000438412 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
HCG18-236ENST00000438412 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
HCG18-236ENST00000438412 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
HCG18-236ENST00000438412 RRP7BPQ9NSQ0 103 aa18.42■□□□□ 0.54
HCG18-236ENST00000438412 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
HCG18-236ENST00000438412 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
HCG18-236ENST00000438412 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
HCG18-236ENST00000438412 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
HCG18-236ENST00000438412 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
HCG18-236ENST00000438412 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
HCG18-236ENST00000438412 DISP1Q96F81 1524 aa18.37■□□□□ 0.53
HCG18-236ENST00000438412 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
HCG18-236ENST00000438412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
HCG18-236ENST00000438412 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
HCG18-236ENST00000438412 NAIPQ13075 1403 aa18.35■□□□□ 0.53
HCG18-236ENST00000438412 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
HCG18-236ENST00000438412 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
HCG18-236ENST00000438412 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.53
HCG18-236ENST00000438412 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
HCG18-236ENST00000438412 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
HCG18-236ENST00000438412 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
HCG18-236ENST00000438412 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
HCG18-236ENST00000438412 KDM6BO15054 1643 aa18.31■□□□□ 0.52
HCG18-236ENST00000438412 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
HCG18-236ENST00000438412 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
HCG18-236ENST00000438412 FOXD1Q16676 465 aa18.28■□□□□ 0.52
HCG18-236ENST00000438412 PLB1Q6P1J6 1458 aa18.27■□□□□ 0.51
HCG18-236ENST00000438412 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.51
HCG18-236ENST00000438412 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
HCG18-236ENST00000438412 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
HCG18-236ENST00000438412 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
HCG18-236ENST00000438412 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
HCG18-236ENST00000438412 DENND4BO75064 1496 aaPredicted RBP18.22■□□□□ 0.51
HCG18-236ENST00000438412 RAPGEF6Q8TEU7 1601 aa18.22■□□□□ 0.51
HCG18-236ENST00000438412 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
HCG18-236ENST00000438412 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
HCG18-236ENST00000438412 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
HCG18-236ENST00000438412 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
HCG18-236ENST00000438412 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
HCG18-236ENST00000438412 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
HCG18-236ENST00000438412 KIF14Q15058 1648 aa18.15■□□□□ 0.5
HCG18-236ENST00000438412 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
HCG18-236ENST00000438412 DAPK1P53355 1430 aa18.13■□□□□ 0.49
HCG18-236ENST00000438412 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
HCG18-236ENST00000438412 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
HCG18-236ENST00000438412 ABCC5O15440 1437 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms