RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 APLP2Q06481 763 aa9.92□□□□□ -0.82
SEMA3A-204ENST00000436949 SYNJ1O43426 1573 aa9.92□□□□□ -0.82
SEMA3A-204ENST00000436949 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
SEMA3A-204ENST00000436949 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
SEMA3A-204ENST00000436949 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
SEMA3A-204ENST00000436949 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
SEMA3A-204ENST00000436949 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
SEMA3A-204ENST00000436949 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
SEMA3A-204ENST00000436949 KIF21BO75037 1637 aa9.85□□□□□ -0.83
SEMA3A-204ENST00000436949 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
SEMA3A-204ENST00000436949 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.83
SEMA3A-204ENST00000436949 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
SEMA3A-204ENST00000436949 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
SEMA3A-204ENST00000436949 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
SEMA3A-204ENST00000436949 ITGAEP38570 1179 aa9.81□□□□□ -0.84
SEMA3A-204ENST00000436949 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
SEMA3A-204ENST00000436949 GAPVD1Q14C86 1478 aa9.78□□□□□ -0.84
SEMA3A-204ENST00000436949 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
SEMA3A-204ENST00000436949 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
SEMA3A-204ENST00000436949 MYT1Q01538 1121 aa9.75□□□□□ -0.85
SEMA3A-204ENST00000436949 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
SEMA3A-204ENST00000436949 SHROOM2Q13796 1616 aa9.74□□□□□ -0.85
SEMA3A-204ENST00000436949 FGD5Q6ZNL6 1462 aa9.72□□□□□ -0.85
SEMA3A-204ENST00000436949 ABCA5Q8WWZ7 1642 aa9.72□□□□□ -0.85
SEMA3A-204ENST00000436949 RAD54L2Q9Y4B4 1467 aa9.72□□□□□ -0.85
SEMA3A-204ENST00000436949 PRXQ9BXM0 1461 aa9.71□□□□□ -0.85
SEMA3A-204ENST00000436949 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.85
SEMA3A-204ENST00000436949 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
SEMA3A-204ENST00000436949 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
SEMA3A-204ENST00000436949 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
SEMA3A-204ENST00000436949 TDRD9Q8NDG6 1382 aaKnown RBP9.69□□□□□ -0.86
SEMA3A-204ENST00000436949 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
SEMA3A-204ENST00000436949 FBLN2P98095 1184 aa9.69□□□□□ -0.86
SEMA3A-204ENST00000436949 NUP160Q12769 1436 aa9.69□□□□□ -0.86
SEMA3A-204ENST00000436949 CUX1P39880 1505 aa9.68□□□□□ -0.86
SEMA3A-204ENST00000436949 BCANQ96GW7 911 aa9.68□□□□□ -0.86
SEMA3A-204ENST00000436949 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
SEMA3A-204ENST00000436949 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
SEMA3A-204ENST00000436949 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
SEMA3A-204ENST00000436949 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
SEMA3A-204ENST00000436949 ADAMTS12P58397 1594 aa9.66□□□□□ -0.86
SEMA3A-204ENST00000436949 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
SEMA3A-204ENST00000436949 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
SEMA3A-204ENST00000436949 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
SEMA3A-204ENST00000436949 SIN3AQ96ST3 1273 aa9.65□□□□□ -0.86
SEMA3A-204ENST00000436949 ERICH3Q5RHP9 1530 aa9.65□□□□□ -0.86
SEMA3A-204ENST00000436949 RAB3GAP2Q9H2M9 1393 aa9.65□□□□□ -0.87
SEMA3A-204ENST00000436949 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
SEMA3A-204ENST00000436949 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
SEMA3A-204ENST00000436949 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
SEMA3A-204ENST00000436949 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
SEMA3A-204ENST00000436949 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
SEMA3A-204ENST00000436949 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
SEMA3A-204ENST00000436949 FAM50AQ14320 339 aaKnown RBP9.61□□□□□ -0.87
SEMA3A-204ENST00000436949 ATP1B4Q9UN42 357 aaPredicted RBP9.61□□□□□ -0.87
SEMA3A-204ENST00000436949 ERCC6L2Q5T890 1561 aa9.6□□□□□ -0.87
SEMA3A-204ENST00000436949 DIP2BQ9P265 1576 aa9.6□□□□□ -0.87
SEMA3A-204ENST00000436949 FHAD1B1AJZ9 1412 aa9.59□□□□□ -0.87
SEMA3A-204ENST00000436949 FKBP8Q14318 412 aa9.59□□□□□ -0.87
SEMA3A-204ENST00000436949 PHLDB1Q86UU1 1377 aa9.57□□□□□ -0.88
SEMA3A-204ENST00000436949 TRIM52Q96A61 297 aa9.57□□□□□ -0.88
SEMA3A-204ENST00000436949 IGF1RP08069 1367 aa9.56□□□□□ -0.88
SEMA3A-204ENST00000436949 KDM6BO15054 1643 aa9.56□□□□□ -0.88
SEMA3A-204ENST00000436949 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
SEMA3A-204ENST00000436949 PPP1R15AO75807 674 aaPredicted RBP9.54□□□□□ -0.88
SEMA3A-204ENST00000436949 ANP32EQ9BTT0 268 aa9.52□□□□□ -0.89
SEMA3A-204ENST00000436949 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
SEMA3A-204ENST00000436949 GLI2P10070 1586 aa9.52□□□□□ -0.89
SEMA3A-204ENST00000436949 LRRC9Q6ZRR7 1453 aa9.51□□□□□ -0.89
SEMA3A-204ENST00000436949 CARMIL1Q5VZK9 1371 aa9.51□□□□□ -0.89
SEMA3A-204ENST00000436949 ILDR1Q86SU0 546 aaPredicted RBP9.51□□□□□ -0.89
SEMA3A-204ENST00000436949 ADCY10Q96PN6 1610 aa9.5□□□□□ -0.89
SEMA3A-204ENST00000436949 PHF23Q9BUL5 403 aaPredicted RBP9.5□□□□□ -0.89
SEMA3A-204ENST00000436949 PRG4Q92954 1404 aaPredicted RBP9.5□□□□□ -0.89
SEMA3A-204ENST00000436949 KDM4FA0A1W2PPD8 638 aa9.5□□□□□ -0.89
SEMA3A-204ENST00000436949 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
SEMA3A-204ENST00000436949 ANP32CO43423 234 aa9.47□□□□□ -0.89
SEMA3A-204ENST00000436949 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.9
SEMA3A-204ENST00000436949 NEFLP07196 543 aa9.45□□□□□ -0.9
SEMA3A-204ENST00000436949 NPM1P06748 294 aaKnown RBP eCLIP9.45□□□□□ -0.9
SEMA3A-204ENST00000436949 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
SEMA3A-204ENST00000436949 FAM69CQ0P6D2 419 aa9.45□□□□□ -0.9
SEMA3A-204ENST00000436949 PCF11O94913 1555 aaKnown RBP9.44□□□□□ -0.9
SEMA3A-204ENST00000436949 PPRC1Q5VV67 1664 aaKnown RBP9.44□□□□□ -0.9
SEMA3A-204ENST00000436949 MAP3K1Q13233 1512 aa9.43□□□□□ -0.9
SEMA3A-204ENST00000436949 ADGRL1O94910 1474 aa9.43□□□□□ -0.9
SEMA3A-204ENST00000436949 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 PLB1Q6P1J6 1458 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 KIAA0586Q9BVV6 1533 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 CCER2I3L3R5 266 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 HECW2Q9P2P5 1572 aa9.42□□□□□ -0.9
SEMA3A-204ENST00000436949 PTPRKQ15262 1439 aa9.41□□□□□ -0.9
SEMA3A-204ENST00000436949 CUL7Q14999 1698 aa9.4□□□□□ -0.9
SEMA3A-204ENST00000436949 TIMELESSQ9UNS1 1208 aa9.4□□□□□ -0.9
SEMA3A-204ENST00000436949 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
SEMA3A-204ENST00000436949 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEMA3A-204ENST00000436949 TEX14Q8IWB6 1497 aa9.39□□□□□ -0.91
SEMA3A-204ENST00000436949 MAP3K4Q9Y6R4 1608 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms