RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 CCDC180Q9P1Z9 1646 aa9.99□□□□□ -0.81
NCL-204ENST00000436894 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
NCL-204ENST00000436894 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
NCL-204ENST00000436894 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
NCL-204ENST00000436894 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
NCL-204ENST00000436894 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
NCL-204ENST00000436894 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
NCL-204ENST00000436894 PYGBP11216 843 aa9.94□□□□□ -0.82
NCL-204ENST00000436894 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.821e-26■■□□□ 13.3
NCL-204ENST00000436894 PAXIP1Q6ZW49 1069 aaPredicted RBP9.93□□□□□ -0.82
NCL-204ENST00000436894 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
NCL-204ENST00000436894 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
NCL-204ENST00000436894 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
NCL-204ENST00000436894 CFAP44Q96MT7 982 aa9.91□□□□□ -0.82
NCL-204ENST00000436894 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
NCL-204ENST00000436894 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
NCL-204ENST00000436894 CHRM1P11229 460 aaPredicted RBP9.87□□□□□ -0.83
NCL-204ENST00000436894 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
NCL-204ENST00000436894 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
NCL-204ENST00000436894 STK25O00506 426 aa9.82□□□□□ -0.84
NCL-204ENST00000436894 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
NCL-204ENST00000436894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.81□□□□□ -0.84
NCL-204ENST00000436894 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
NCL-204ENST00000436894 ZFP91Q96JP5 570 aaPredicted RBP9.81□□□□□ -0.84
NCL-204ENST00000436894 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
NCL-204ENST00000436894 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
NCL-204ENST00000436894 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
NCL-204ENST00000436894 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
NCL-204ENST00000436894 PCDHB8Q9UN66 801 aa9.77□□□□□ -0.85
NCL-204ENST00000436894 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
NCL-204ENST00000436894 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
NCL-204ENST00000436894 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
NCL-204ENST00000436894 TAOK2Q9UL54 1235 aa9.76□□□□□ -0.85
NCL-204ENST00000436894 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
NCL-204ENST00000436894 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
NCL-204ENST00000436894 GTPBP6O43824 516 aaPredicted RBP9.71□□□□□ -0.86
NCL-204ENST00000436894 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
NCL-204ENST00000436894 MAP3K13O43283 966 aa9.69□□□□□ -0.86
NCL-204ENST00000436894 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
NCL-204ENST00000436894 CD44P16070 742 aaKnown RBP9.68□□□□□ -0.86
NCL-204ENST00000436894 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
NCL-204ENST00000436894 KIF12Q96FN5 646 aa9.68□□□□□ -0.86
NCL-204ENST00000436894 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
NCL-204ENST00000436894 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
NCL-204ENST00000436894 PHF12Q96QT6 1004 aa9.67□□□□□ -0.86
NCL-204ENST00000436894 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
NCL-204ENST00000436894 PSEN1P49768 467 aa9.65□□□□□ -0.86
NCL-204ENST00000436894 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
NCL-204ENST00000436894 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
NCL-204ENST00000436894 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
NCL-204ENST00000436894 MFRPQ9BY79 579 aa9.56□□□□□ -0.88
NCL-204ENST00000436894 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
NCL-204ENST00000436894 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
NCL-204ENST00000436894 MS4A3Q96HJ5 214 aa9.54□□□□□ -0.88
NCL-204ENST00000436894 BCANQ96GW7 911 aa9.53□□□□□ -0.88
NCL-204ENST00000436894 NACADO15069 1562 aa9.53□□□□□ -0.88
NCL-204ENST00000436894 EVX2Q03828 476 aa9.51□□□□□ -0.89
NCL-204ENST00000436894 CADPS2Q86UW7 1296 aa9.51□□□□□ -0.89
NCL-204ENST00000436894 PPP1R37O75864 691 aa9.5□□□□□ -0.89
NCL-204ENST00000436894 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
NCL-204ENST00000436894 PHF8Q9UPP1 1060 aa9.5□□□□□ -0.89
NCL-204ENST00000436894 FBXO22Q8NEZ5 403 aa9.48□□□□□ -0.89
NCL-204ENST00000436894 TMEM106CQ9BVX2 250 aa9.48□□□□□ -0.89
NCL-204ENST00000436894 HAX1O00165 279 aa9.46□□□□□ -0.9
NCL-204ENST00000436894 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
NCL-204ENST00000436894 SOX12O15370 315 aa9.43□□□□□ -0.9
NCL-204ENST00000436894 NLRP6P59044 892 aa9.43□□□□□ -0.9
NCL-204ENST00000436894 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
NCL-204ENST00000436894 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
NCL-204ENST00000436894 SP7Q8TDD2 431 aaPredicted RBP9.42□□□□□ -0.9
NCL-204ENST00000436894 TTLL13PA6NNM8 815 aa9.41□□□□□ -0.9
NCL-204ENST00000436894 BMP2KQ9NSY1 1161 aaPredicted RBP9.4□□□□□ -0.9
NCL-204ENST00000436894 GOLGA2Q08379 1002 aa9.38□□□□□ -0.91
NCL-204ENST00000436894 TIE1P35590 1138 aa9.37□□□□□ -0.91
NCL-204ENST00000436894 MKRN3Q13064 507 aaKnown RBP9.36□□□□□ -0.91
NCL-204ENST00000436894 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
NCL-204ENST00000436894 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
NCL-204ENST00000436894 NBR1Q14596 966 aa9.34□□□□□ -0.91
NCL-204ENST00000436894 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
NCL-204ENST00000436894 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
NCL-204ENST00000436894 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
NCL-204ENST00000436894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.924e-16■■■■□ 20.2
NCL-204ENST00000436894 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
NCL-204ENST00000436894 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
NCL-204ENST00000436894 WDR70Q9NW82 654 aa9.3□□□□□ -0.92
NCL-204ENST00000436894 BICRAQ9NZM4 1560 aa9.29□□□□□ -0.92
NCL-204ENST00000436894 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
NCL-204ENST00000436894 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
NCL-204ENST00000436894 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
NCL-204ENST00000436894 SHROOM4Q9ULL8 1493 aa9.27□□□□□ -0.93
NCL-204ENST00000436894 GABBR2O75899 941 aa9.26□□□□□ -0.93
NCL-204ENST00000436894 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
NCL-204ENST00000436894 ASTLQ6HA08 431 aaPredicted RBP9.24□□□□□ -0.93
NCL-204ENST00000436894 PDCD7Q8N8D1 485 aaKnown RBP9.24□□□□□ -0.93
NCL-204ENST00000436894 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
NCL-204ENST00000436894 CLCN6P51797 869 aa9.22□□□□□ -0.93
NCL-204ENST00000436894 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
NCL-204ENST00000436894 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
NCL-204ENST00000436894 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.93
NCL-204ENST00000436894 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms