RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
HMGB1P45-201ENST00000435986 PLCB2Q00722 1185 aa10.61□□□□□ -0.71
HMGB1P45-201ENST00000435986 PKD2Q13563 968 aa10.61□□□□□ -0.71
HMGB1P45-201ENST00000435986 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
HMGB1P45-201ENST00000435986 ZNF579Q8NAF0 562 aaKnown RBP10.6□□□□□ -0.71
HMGB1P45-201ENST00000435986 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
HMGB1P45-201ENST00000435986 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
HMGB1P45-201ENST00000435986 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P45-201ENST00000435986 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P45-201ENST00000435986 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
HMGB1P45-201ENST00000435986 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
HMGB1P45-201ENST00000435986 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
HMGB1P45-201ENST00000435986 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P45-201ENST00000435986 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
HMGB1P45-201ENST00000435986 CIZ1Q9ULV3 898 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P45-201ENST00000435986 CLCN6P51797 869 aa10.49□□□□□ -0.73
HMGB1P45-201ENST00000435986 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
HMGB1P45-201ENST00000435986 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
HMGB1P45-201ENST00000435986 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
HMGB1P45-201ENST00000435986 GSE1Q14687 1217 aa10.43□□□□□ -0.74
HMGB1P45-201ENST00000435986 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
HMGB1P45-201ENST00000435986 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
HMGB1P45-201ENST00000435986 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
HMGB1P45-201ENST00000435986 MAP3K13O43283 966 aa10.38□□□□□ -0.75
HMGB1P45-201ENST00000435986 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
HMGB1P45-201ENST00000435986 RGL2O15211 777 aa10.37□□□□□ -0.75
HMGB1P45-201ENST00000435986 DCBLD2Q96PD2 775 aa10.36□□□□□ -0.75
HMGB1P45-201ENST00000435986 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
HMGB1P45-201ENST00000435986 PYGBP11216 843 aa10.35□□□□□ -0.75
HMGB1P45-201ENST00000435986 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P45-201ENST00000435986 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
HMGB1P45-201ENST00000435986 SGIP1Q9BQI5 828 aa10.34□□□□□ -0.75
HMGB1P45-201ENST00000435986 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
HMGB1P45-201ENST00000435986 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
HMGB1P45-201ENST00000435986 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
HMGB1P45-201ENST00000435986 CHRM1P11229 460 aaPredicted RBP10.31□□□□□ -0.76
HMGB1P45-201ENST00000435986 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
HMGB1P45-201ENST00000435986 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
HMGB1P45-201ENST00000435986 BCANQ96GW7 911 aa10.28□□□□□ -0.76
HMGB1P45-201ENST00000435986 ASTLQ6HA08 431 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P45-201ENST00000435986 ATMINO43313 823 aaPredicted RBP10.25□□□□□ -0.77
HMGB1P45-201ENST00000435986 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
HMGB1P45-201ENST00000435986 TIE1P35590 1138 aa10.24□□□□□ -0.77
HMGB1P45-201ENST00000435986 LHX8Q68G74 356 aa10.24□□□□□ -0.77
HMGB1P45-201ENST00000435986 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
HMGB1P45-201ENST00000435986 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
HMGB1P45-201ENST00000435986 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
HMGB1P45-201ENST00000435986 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
HMGB1P45-201ENST00000435986 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
HMGB1P45-201ENST00000435986 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P45-201ENST00000435986 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
HMGB1P45-201ENST00000435986 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P45-201ENST00000435986 VGFO15240 615 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P45-201ENST00000435986 TMEM106CQ9BVX2 250 aa10.15□□□□□ -0.78
HMGB1P45-201ENST00000435986 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
HMGB1P45-201ENST00000435986 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
HMGB1P45-201ENST00000435986 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
HMGB1P45-201ENST00000435986 METRNQ9UJH8 293 aa10.13□□□□□ -0.79
HMGB1P45-201ENST00000435986 POTEJP0CG39 1038 aa10.12□□□□□ -0.79
HMGB1P45-201ENST00000435986 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
HMGB1P45-201ENST00000435986 STK25O00506 426 aa10.11□□□□□ -0.79
HMGB1P45-201ENST00000435986 PSEN1P49768 467 aa10.11□□□□□ -0.79
HMGB1P45-201ENST00000435986 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
HMGB1P45-201ENST00000435986 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
HMGB1P45-201ENST00000435986 C7P10643 843 aa10.08□□□□□ -0.8
HMGB1P45-201ENST00000435986 TSHZ2Q9NRE2 1034 aa10.08□□□□□ -0.8
HMGB1P45-201ENST00000435986 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P45-201ENST00000435986 KDM2AQ9Y2K7 1162 aa10.07□□□□□ -0.8
HMGB1P45-201ENST00000435986 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
HMGB1P45-201ENST00000435986 IER5LQ5T953 404 aa10.05□□□□□ -0.8
HMGB1P45-201ENST00000435986 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
HMGB1P45-201ENST00000435986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P45-201ENST00000435986 ZFP91Q96JP5 570 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P45-201ENST00000435986 IRX5P78411 483 aaPredicted RBP10□□□□□ -0.81
HMGB1P45-201ENST00000435986 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
HMGB1P45-201ENST00000435986 NBR1Q14596 966 aa9.99□□□□□ -0.81
HMGB1P45-201ENST00000435986 CABP2Q9NPB3 220 aa9.98□□□□□ -0.81
HMGB1P45-201ENST00000435986 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P45-201ENST00000435986 SEC24BO95487 1268 aa9.95□□□□□ -0.82
HMGB1P45-201ENST00000435986 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P45-201ENST00000435986 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
HMGB1P45-201ENST00000435986 MKRN3Q13064 507 aaKnown RBP9.94□□□□□ -0.82
HMGB1P45-201ENST00000435986 NKX1-1Q15270 411 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P45-201ENST00000435986 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
HMGB1P45-201ENST00000435986 OCEL1Q9H607 264 aa9.93□□□□□ -0.82
HMGB1P45-201ENST00000435986 PLCG2P16885 1265 aa9.92□□□□□ -0.82
HMGB1P45-201ENST00000435986 EFCAB3Q8N7B9 438 aa9.92□□□□□ -0.82
HMGB1P45-201ENST00000435986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGB1P45-201ENST00000435986 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
HMGB1P45-201ENST00000435986 SOX12O15370 315 aa9.84□□□□□ -0.83
HMGB1P45-201ENST00000435986 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
HMGB1P45-201ENST00000435986 WDR70Q9NW82 654 aa9.84□□□□□ -0.83
HMGB1P45-201ENST00000435986 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
HMGB1P45-201ENST00000435986 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
HMGB1P45-201ENST00000435986 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
HMGB1P45-201ENST00000435986 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
HMGB1P45-201ENST00000435986 MFRPQ9BY79 579 aa9.81□□□□□ -0.84
HMGB1P45-201ENST00000435986 FBXO22Q8NEZ5 403 aa9.8□□□□□ -0.84
HMGB1P45-201ENST00000435986 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
HMGB1P45-201ENST00000435986 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms