RNA–Protein interactions for RNA: ENST00000435683.6

ABCA7-203, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ABCA7, Length 6,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-203ENST00000435683 NBR1Q14596 966 aa19.34■□□□□ 0.69
ABCA7-203ENST00000435683 NPHP1O15259 732 aa19.32■□□□□ 0.68
ABCA7-203ENST00000435683 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
ABCA7-203ENST00000435683 TPRNQ4KMQ1 711 aa19.31■□□□□ 0.68
ABCA7-203ENST00000435683 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
ABCA7-203ENST00000435683 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
ABCA7-203ENST00000435683 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
ABCA7-203ENST00000435683 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
ABCA7-203ENST00000435683 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
ABCA7-203ENST00000435683 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
ABCA7-203ENST00000435683 BECN1Q14457 450 aa19.17■□□□□ 0.66
ABCA7-203ENST00000435683 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
ABCA7-203ENST00000435683 GOLGA6L22H0YM25 854 aa19.15■□□□□ 0.66
ABCA7-203ENST00000435683 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
ABCA7-203ENST00000435683 PPM1GO15355 546 aaPredicted RBP19.14■□□□□ 0.66
ABCA7-203ENST00000435683 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
ABCA7-203ENST00000435683 TRIM44Q96DX7 344 aaPredicted RBP19.14■□□□□ 0.65
ABCA7-203ENST00000435683 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
ABCA7-203ENST00000435683 CLSTN1O94985 981 aa19.1■□□□□ 0.65
ABCA7-203ENST00000435683 PTMAP06454 111 aaKnown RBP19.09■□□□□ 0.65
ABCA7-203ENST00000435683 DDRGK1Q96HY6 314 aa19.09■□□□□ 0.65
ABCA7-203ENST00000435683 LAS1LQ9Y4W2 734 aaKnown RBP19.06■□□□□ 0.64
ABCA7-203ENST00000435683 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
ABCA7-203ENST00000435683 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
ABCA7-203ENST00000435683 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
ABCA7-203ENST00000435683 RRP7BPQ9NSQ0 103 aa19.05■□□□□ 0.64
ABCA7-203ENST00000435683 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
ABCA7-203ENST00000435683 FTSJ3Q8IY81 847 aaKnown RBP19.04■□□□□ 0.64
ABCA7-203ENST00000435683 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
ABCA7-203ENST00000435683 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.64
ABCA7-203ENST00000435683 DNTTIP2Q5QJE6 756 aaKnown RBP19■□□□□ 0.63
ABCA7-203ENST00000435683 MAPK8IP3Q9UPT6 1336 aa18.99■□□□□ 0.63
ABCA7-203ENST00000435683 GOLGA2Q08379 1002 aa18.99■□□□□ 0.63
ABCA7-203ENST00000435683 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
ABCA7-203ENST00000435683 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
ABCA7-203ENST00000435683 OS9Q13438 667 aaPredicted RBP18.98■□□□□ 0.63
ABCA7-203ENST00000435683 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
ABCA7-203ENST00000435683 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
ABCA7-203ENST00000435683 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
ABCA7-203ENST00000435683 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
ABCA7-203ENST00000435683 POGKQ9P215 609 aa18.96■□□□□ 0.63
ABCA7-203ENST00000435683 FGD1P98174 961 aa18.95■□□□□ 0.62
ABCA7-203ENST00000435683 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
ABCA7-203ENST00000435683 NAP1L2Q9ULW6 460 aaPredicted RBP18.95■□□□□ 0.62
ABCA7-203ENST00000435683 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
ABCA7-203ENST00000435683 PLCB2Q00722 1185 aa18.91■□□□□ 0.62
ABCA7-203ENST00000435683 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
ABCA7-203ENST00000435683 KCNJ4P48050 445 aa18.89■□□□□ 0.61
ABCA7-203ENST00000435683 AMER1Q5JTC6 1135 aaPredicted RBP18.86■□□□□ 0.61
ABCA7-203ENST00000435683 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
ABCA7-203ENST00000435683 SOX12O15370 315 aa18.84■□□□□ 0.61
ABCA7-203ENST00000435683 PRM3Q9NNZ6 103 aa18.84■□□□□ 0.61
ABCA7-203ENST00000435683 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
ABCA7-203ENST00000435683 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.61
ABCA7-203ENST00000435683 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
ABCA7-203ENST00000435683 CFDP1Q9UEE9 299 aaPredicted RBP18.81■□□□□ 0.6
ABCA7-203ENST00000435683 CHMP4BQ9H444 224 aaKnown RBP18.81■□□□□ 0.6
ABCA7-203ENST00000435683 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
ABCA7-203ENST00000435683 MIER1Q8N108 512 aa18.79■□□□□ 0.6
ABCA7-203ENST00000435683 NRDCO43847 1150 aa18.78■□□□□ 0.6
ABCA7-203ENST00000435683 RGS3P49796 1198 aa18.77■□□□□ 0.59
ABCA7-203ENST00000435683 PNNQ9H307 717 aaKnown RBP18.76■□□□□ 0.59
ABCA7-203ENST00000435683 MLECQ14165 292 aa18.76■□□□□ 0.59
ABCA7-203ENST00000435683 GOLGA6L4A6NEF3 574 aa18.76■□□□□ 0.59
ABCA7-203ENST00000435683 CLIP1P30622 1438 aa18.76■□□□□ 0.59
ABCA7-203ENST00000435683 MS4A1P11836 297 aa18.73■□□□□ 0.59
ABCA7-203ENST00000435683 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
ABCA7-203ENST00000435683 NAP1L5Q96NT1 182 aaPredicted RBP18.72■□□□□ 0.59
ABCA7-203ENST00000435683 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.72■□□□□ 0.59
ABCA7-203ENST00000435683 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
ABCA7-203ENST00000435683 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
ABCA7-203ENST00000435683 HDGFP51858 240 aaKnown RBP18.69■□□□□ 0.58
ABCA7-203ENST00000435683 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
ABCA7-203ENST00000435683 GNL2Q13823 731 aaKnown RBP18.68■□□□□ 0.58
ABCA7-203ENST00000435683 PDE4CQ08493 712 aa18.67■□□□□ 0.58
ABCA7-203ENST00000435683 MCCP23508 829 aa18.66■□□□□ 0.58
ABCA7-203ENST00000435683 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
ABCA7-203ENST00000435683 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
ABCA7-203ENST00000435683 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
ABCA7-203ENST00000435683 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
ABCA7-203ENST00000435683 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
ABCA7-203ENST00000435683 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
ABCA7-203ENST00000435683 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
ABCA7-203ENST00000435683 DRC7Q8IY82 874 aa18.63■□□□□ 0.57
ABCA7-203ENST00000435683 KANK1Q14678 1352 aa18.62■□□□□ 0.57
ABCA7-203ENST00000435683 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
ABCA7-203ENST00000435683 L1TD1Q5T7N2 865 aaKnown RBP18.62■□□□□ 0.57
ABCA7-203ENST00000435683 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
ABCA7-203ENST00000435683 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
ABCA7-203ENST00000435683 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
ABCA7-203ENST00000435683 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
ABCA7-203ENST00000435683 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
ABCA7-203ENST00000435683 TMF1P82094 1093 aa18.58■□□□□ 0.57
ABCA7-203ENST00000435683 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
ABCA7-203ENST00000435683 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
ABCA7-203ENST00000435683 RTN4Q9NQC3 1192 aaKnown RBP18.55■□□□□ 0.56
ABCA7-203ENST00000435683 APBB1O00213 710 aa18.53■□□□□ 0.56
ABCA7-203ENST00000435683 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
ABCA7-203ENST00000435683 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
ABCA7-203ENST00000435683 SPRYD3Q8NCJ5 442 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms