RNA–Protein interactions for RNA: ENST00000435683.6

ABCA7-203, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ABCA7, Length 6,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-203ENST00000435683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.21e-10■■■■■ 39.3
ABCA7-203ENST00000435683 GTF2F1P35269 517 aaKnown RBP eCLIP16.55■□□□□ 0.248e-10■■■■■ 41.7
ABCA7-203ENST00000435683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.29□□□□□ -0.123e-9■■■□□ 17
ABCA7-203ENST00000435683 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.396e-9■■■□□ 18.1
ABCA7-203ENST00000435683 ILF3Q12906 894 aaKnown RBP eCLIP14.52□□□□□ -0.081e-8■■■□□ 15.7
ABCA7-203ENST00000435683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.171e-8■■■□□ 15.4
ABCA7-203ENST00000435683 HNRNPLP14866 589 aaKnown RBP eCLIP14.53□□□□□ -0.082e-8■□□□□ 9
ABCA7-203ENST00000435683 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.53□□□□□ -0.082e-8■■■■□ 21
ABCA7-203ENST00000435683 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.162e-8■■■□□ 18.8
ABCA7-203ENST00000435683 PUM1Q14671 1186 aaKnown RBP eCLIP14.43□□□□□ -0.15e-8■□□□□ 9.4
ABCA7-203ENST00000435683 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.39■□□□□ 0.375e-8■■■■■ 33.8
ABCA7-203ENST00000435683 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.37e-8■■■□□ 17.8
ABCA7-203ENST00000435683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.737e-8■□□□□ 10.3
ABCA7-203ENST00000435683 PPIGQ13427 754 aaKnown RBP eCLIP14.51□□□□□ -0.099e-8■■■■■ 45.9
ABCA7-203ENST00000435683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■■□□ 15.7
ABCA7-203ENST00000435683 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.33■□□□□ 0.052e-7■■■■■ 30.5
ABCA7-203ENST00000435683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.86■□□□□ 0.452e-7■■■■■ 146.9
ABCA7-203ENST00000435683 XRCC6P12956 609 aaKnown RBP eCLIP16.14■□□□□ 0.172e-7■■□□□ 13.8
ABCA7-203ENST00000435683 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.293e-7■□□□□ 10.5
ABCA7-203ENST00000435683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.073e-7■■□□□ 13.5
ABCA7-203ENST00000435683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.22□□□□□ -0.133e-7■■■■■ 92.8
ABCA7-203ENST00000435683 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■■■■□ 22.2
ABCA7-203ENST00000435683 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.34e-7■■■■■ 31.2
ABCA7-203ENST00000435683 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.45□□□□□ -0.14e-7■□□□□ 8.2
ABCA7-203ENST00000435683 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.825e-7■■■■□ 21.4
ABCA7-203ENST00000435683 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.39□□□□□ -0.275e-7■■■■■ 47.8
ABCA7-203ENST00000435683 RBM15Q96T37 977 aaKnown RBP eCLIP15.19■□□□□ 0.025e-7■■□□□ 14.2
ABCA7-203ENST00000435683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.166e-7■■■□□ 16.1
ABCA7-203ENST00000435683 EFTUD2Q15029 972 aaKnown RBP eCLIP15.51■□□□□ 0.076e-7■■■■□ 23.3
ABCA7-203ENST00000435683 SF3B4Q15427 424 aaKnown RBP eCLIP13.95□□□□□ -0.186e-7■■■■■ 36.5
ABCA7-203ENST00000435683 NCBP2P52298 156 aaKnown RBP eCLIP14.37□□□□□ -0.116e-7■□□□□ 8.7
ABCA7-203ENST00000435683 EIF3HO15372 352 aaKnown RBP eCLIP14.96□□□□□ -0.017e-7■□□□□ 9.9
ABCA7-203ENST00000435683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.597e-7■■■□□ 18
ABCA7-203ENST00000435683 ZRANB2O95218 330 aaKnown RBP eCLIP15.49■□□□□ 0.071e-6■■■■□ 21.9
ABCA7-203ENST00000435683 HNRNPKP61978 463 aaKnown RBP eCLIP14.03□□□□□ -0.161e-6■■■■□ 19.8
ABCA7-203ENST00000435683 SF3A3Q12874 501 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■■■ 40.2
ABCA7-203ENST00000435683 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■□□ 17.9
ABCA7-203ENST00000435683 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.62□□□□□ -0.071e-6■■■■□ 23
ABCA7-203ENST00000435683 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■■■■ 31.6
ABCA7-203ENST00000435683 PCBP2Q15366 365 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■■■ 39.2
ABCA7-203ENST00000435683 DDX3XO00571 662 aaKnown RBP eCLIP14.57□□□□□ -0.081e-6■■■■■ 34.7
ABCA7-203ENST00000435683 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■■□□ 18.8
ABCA7-203ENST00000435683 PRPF4O43172 522 aaKnown RBP eCLIP15.6■□□□□ 0.092e-6■■■■□ 21.7
ABCA7-203ENST00000435683 RPS3P23396 243 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■□□□□ 10.3
ABCA7-203ENST00000435683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■■ 30.8
ABCA7-203ENST00000435683 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.383e-6■■■■□ 21.7
ABCA7-203ENST00000435683 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.01□□□□□ -0.013e-6■□□□□ 10.8
ABCA7-203ENST00000435683 SF3B1O75533 1304 aaKnown RBP eCLIP14.87□□□□□ -0.033e-6■■■■■ 115.2
ABCA7-203ENST00000435683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.84□□□□□ -0.034e-6■■■■□ 23
ABCA7-203ENST00000435683 AARSP49588 968 aaKnown RBP eCLIP15.52■□□□□ 0.084e-6■■■□□ 17.3
ABCA7-203ENST00000435683 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.726e-6■■■□□ 15.9
ABCA7-203ENST00000435683 RBM22Q9NW64 420 aaKnown RBP eCLIP14.93□□□□□ -0.021e-5■■■■□ 22.7
Retrieved 52 of 52 RNA–protein pairs in 10.9 ms