RNA–Protein interactions for RNA: ENST00000435683.6

ABCA7-203, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ABCA7, Length 6,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-203ENST00000435683 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
ABCA7-203ENST00000435683 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.37
ABCA7-203ENST00000435683 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
ABCA7-203ENST00000435683 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
ABCA7-203ENST00000435683 APLP2Q06481 763 aa23.02■■□□□ 1.27
ABCA7-203ENST00000435683 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
ABCA7-203ENST00000435683 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
ABCA7-203ENST00000435683 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
ABCA7-203ENST00000435683 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
ABCA7-203ENST00000435683 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
ABCA7-203ENST00000435683 ATP1B4Q9UN42 357 aaPredicted RBP22.34■■□□□ 1.17
ABCA7-203ENST00000435683 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
ABCA7-203ENST00000435683 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
ABCA7-203ENST00000435683 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
ABCA7-203ENST00000435683 MYT1Q01538 1121 aa22.14■■□□□ 1.13
ABCA7-203ENST00000435683 CENPBP07199 599 aaPredicted RBP22.04■■□□□ 1.12
ABCA7-203ENST00000435683 NEFLP07196 543 aa21.87■■□□□ 1.09
ABCA7-203ENST00000435683 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
ABCA7-203ENST00000435683 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
ABCA7-203ENST00000435683 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
ABCA7-203ENST00000435683 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
ABCA7-203ENST00000435683 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
ABCA7-203ENST00000435683 YTHDC1Q96MU7 727 aaKnown RBP21.66■■□□□ 1.06
ABCA7-203ENST00000435683 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
ABCA7-203ENST00000435683 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
ABCA7-203ENST00000435683 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
ABCA7-203ENST00000435683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
ABCA7-203ENST00000435683 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
ABCA7-203ENST00000435683 SLC4A1APQ9BWU0 796 aaKnown RBP21.39■■□□□ 1.01
ABCA7-203ENST00000435683 PPARGC1BQ86YN6 1023 aaKnown RBP21.32■■□□□ 1
ABCA7-203ENST00000435683 ITGAEP38570 1179 aa21.28■■□□□ 1
ABCA7-203ENST00000435683 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
ABCA7-203ENST00000435683 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
ABCA7-203ENST00000435683 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
ABCA7-203ENST00000435683 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
ABCA7-203ENST00000435683 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
ABCA7-203ENST00000435683 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
ABCA7-203ENST00000435683 ZBTB47Q9UFB7 747 aaPredicted RBP20.68■□□□□ 0.9
ABCA7-203ENST00000435683 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
ABCA7-203ENST00000435683 HRCP23327 699 aa20.66■□□□□ 0.9
ABCA7-203ENST00000435683 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
ABCA7-203ENST00000435683 BCANQ96GW7 911 aa20.64■□□□□ 0.89
ABCA7-203ENST00000435683 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
ABCA7-203ENST00000435683 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
ABCA7-203ENST00000435683 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
ABCA7-203ENST00000435683 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
ABCA7-203ENST00000435683 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
ABCA7-203ENST00000435683 FBLN2P98095 1184 aa20.4■□□□□ 0.86
ABCA7-203ENST00000435683 NEFMP07197 916 aa20.4■□□□□ 0.86
ABCA7-203ENST00000435683 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
ABCA7-203ENST00000435683 ANP32CO43423 234 aa20.28■□□□□ 0.84
ABCA7-203ENST00000435683 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
ABCA7-203ENST00000435683 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.825e-7■■■■□ 21.4
ABCA7-203ENST00000435683 ESF1Q9H501 851 aaKnown RBP20.16■□□□□ 0.82
ABCA7-203ENST00000435683 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
ABCA7-203ENST00000435683 A0A0G2JS52 829 aa20.11■□□□□ 0.81
ABCA7-203ENST00000435683 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
ABCA7-203ENST00000435683 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
ABCA7-203ENST00000435683 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
ABCA7-203ENST00000435683 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
ABCA7-203ENST00000435683 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
ABCA7-203ENST00000435683 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
ABCA7-203ENST00000435683 ANP32AP39687 249 aaKnown RBP19.95■□□□□ 0.78
ABCA7-203ENST00000435683 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
ABCA7-203ENST00000435683 HSP90AA1P07900 732 aaKnown RBP19.94■□□□□ 0.78
ABCA7-203ENST00000435683 ANP32BQ92688 251 aaKnown RBP19.93■□□□□ 0.78
ABCA7-203ENST00000435683 ABCC9O60706 1549 aa19.89■□□□□ 0.78
ABCA7-203ENST00000435683 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
ABCA7-203ENST00000435683 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
ABCA7-203ENST00000435683 ZBTB7CA1YPR0 619 aa19.79■□□□□ 0.76
ABCA7-203ENST00000435683 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
ABCA7-203ENST00000435683 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
ABCA7-203ENST00000435683 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
ABCA7-203ENST00000435683 CDK11BP21127 795 aaKnown RBP19.7■□□□□ 0.74
ABCA7-203ENST00000435683 TULP1O00294 542 aaPredicted RBP19.7■□□□□ 0.74
ABCA7-203ENST00000435683 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
ABCA7-203ENST00000435683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.737e-8■□□□□ 10.3
ABCA7-203ENST00000435683 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
ABCA7-203ENST00000435683 C14orf37Q86TY3 774 aa19.6■□□□□ 0.73
ABCA7-203ENST00000435683 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.73
ABCA7-203ENST00000435683 ARXQ96QS3 562 aa19.58■□□□□ 0.72
ABCA7-203ENST00000435683 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
ABCA7-203ENST00000435683 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.726e-6■■■□□ 15.9
ABCA7-203ENST00000435683 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
ABCA7-203ENST00000435683 FKBP8Q14318 412 aa19.53■□□□□ 0.72
ABCA7-203ENST00000435683 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
ABCA7-203ENST00000435683 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
ABCA7-203ENST00000435683 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
ABCA7-203ENST00000435683 TMC1Q8TDI8 760 aa19.48■□□□□ 0.71
ABCA7-203ENST00000435683 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
ABCA7-203ENST00000435683 GLIPR1L2Q4G1C9 344 aa19.47■□□□□ 0.71
ABCA7-203ENST00000435683 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
ABCA7-203ENST00000435683 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
ABCA7-203ENST00000435683 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
ABCA7-203ENST00000435683 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
ABCA7-203ENST00000435683 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
ABCA7-203ENST00000435683 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
ABCA7-203ENST00000435683 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
ABCA7-203ENST00000435683 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
ABCA7-203ENST00000435683 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms