RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
PTPN12-206ENST00000435495 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
PTPN12-206ENST00000435495 SUPT5HO00267 1087 aaKnown RBP7.65□□□□□ -1.18
PTPN12-206ENST00000435495 STAG3Q9UJ98 1225 aa7.62□□□□□ -1.19
PTPN12-206ENST00000435495 SSUH2Q9Y2M2 353 aa7.62□□□□□ -1.19
PTPN12-206ENST00000435495 STK25O00506 426 aa7.61□□□□□ -1.19
PTPN12-206ENST00000435495 MYT1Q01538 1121 aa7.61□□□□□ -1.19
PTPN12-206ENST00000435495 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
PTPN12-206ENST00000435495 RNF39Q9H2S5 420 aa7.6□□□□□ -1.19
PTPN12-206ENST00000435495 KCNV2Q8TDN2 545 aa7.57□□□□□ -1.2
PTPN12-206ENST00000435495 BRPF1P55201 1214 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-206ENST00000435495 CADPS2Q86UW7 1296 aa7.56□□□□□ -1.2
PTPN12-206ENST00000435495 LMOD2Q6P5Q4 547 aa7.54□□□□□ -1.2
PTPN12-206ENST00000435495 RIOK3O14730 519 aaKnown RBP7.53□□□□□ -1.2
PTPN12-206ENST00000435495 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-206ENST00000435495 ZBTB12Q9Y330 459 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-206ENST00000435495 SPDYE2BA6NHP3 402 aa7.52□□□□□ -1.21
PTPN12-206ENST00000435495 SPDYE6P0CI01 402 aa7.52□□□□□ -1.21
PTPN12-206ENST00000435495 SPDYE2Q495Y8 402 aa7.52□□□□□ -1.21
PTPN12-206ENST00000435495 NUBP1P53384 320 aa7.51□□□□□ -1.21
PTPN12-206ENST00000435495 STK24Q9Y6E0 443 aa7.51□□□□□ -1.21
PTPN12-206ENST00000435495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-206ENST00000435495 DSG3P32926 999 aa7.5□□□□□ -1.21
PTPN12-206ENST00000435495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPN12-206ENST00000435495 ZFP91Q96JP5 570 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-206ENST00000435495 DCAF8Q5TAQ9 597 aa7.5□□□□□ -1.21
PTPN12-206ENST00000435495 NPM2Q86SE8 214 aaKnown RBP7.48□□□□□ -1.21
PTPN12-206ENST00000435495 UBTFP17480 764 aaKnown RBP7.47□□□□□ -1.21
PTPN12-206ENST00000435495 PYGBP11216 843 aa7.46□□□□□ -1.21
PTPN12-206ENST00000435495 PLEKHG5O94827 1062 aa7.46□□□□□ -1.22
PTPN12-206ENST00000435495 NEUROD2Q15784 382 aa7.46□□□□□ -1.22
PTPN12-206ENST00000435495 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
PTPN12-206ENST00000435495 ZBTB47Q9UFB7 747 aaPredicted RBP7.45□□□□□ -1.22
PTPN12-206ENST00000435495 RASEFQ8IZ41 740 aa7.45□□□□□ -1.22
PTPN12-206ENST00000435495 SEMA3EO15041 775 aa7.42□□□□□ -1.22
PTPN12-206ENST00000435495 GSE1Q14687 1217 aa7.41□□□□□ -1.22
PTPN12-206ENST00000435495 VGFO15240 615 aaPredicted RBP7.41□□□□□ -1.22
PTPN12-206ENST00000435495 ZC3H15Q8WU90 426 aaKnown RBP7.41□□□□□ -1.22
PTPN12-206ENST00000435495 C1QBPQ07021 282 aaKnown RBP7.39□□□□□ -1.23
PTPN12-206ENST00000435495 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
PTPN12-206ENST00000435495 MNX1P50219 401 aaPredicted RBP7.39□□□□□ -1.23
PTPN12-206ENST00000435495 P3H3Q8IVL6 736 aa7.38□□□□□ -1.23
PTPN12-206ENST00000435495 TRIM26Q12899 539 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-206ENST00000435495 GPBP1L1Q9HC44 474 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-206ENST00000435495 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
PTPN12-206ENST00000435495 ARID3AQ99856 593 aa7.35□□□□□ -1.23
PTPN12-206ENST00000435495 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
PTPN12-206ENST00000435495 PPP1R37O75864 691 aa7.33□□□□□ -1.24
PTPN12-206ENST00000435495 CREBZFQ9NS37 354 aa7.33□□□□□ -1.24
PTPN12-206ENST00000435495 CLEC11AQ9Y240 323 aa7.33□□□□□ -1.24
PTPN12-206ENST00000435495 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
PTPN12-206ENST00000435495 HRCP23327 699 aa7.29□□□□□ -1.24
PTPN12-206ENST00000435495 IL27Q8NEV9 243 aa7.29□□□□□ -1.24
PTPN12-206ENST00000435495 C1orf115Q9H7X2 142 aa7.29□□□□□ -1.24
PTPN12-206ENST00000435495 PCDHB8Q9UN66 801 aa7.28□□□□□ -1.24
PTPN12-206ENST00000435495 PCDHB13Q9Y5F0 798 aa7.28□□□□□ -1.24
PTPN12-206ENST00000435495 ARID3CA6NKF2 412 aa7.27□□□□□ -1.25
PTPN12-206ENST00000435495 TESPA1A2RU30 521 aaPredicted RBP7.25□□□□□ -1.25
PTPN12-206ENST00000435495 ZMYND10O75800 440 aa7.24□□□□□ -1.25
PTPN12-206ENST00000435495 TSPYL2Q9H2G4 693 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-206ENST00000435495 CHRM1P11229 460 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-206ENST00000435495 E2F4Q16254 413 aa7.23□□□□□ -1.25
PTPN12-206ENST00000435495 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
PTPN12-206ENST00000435495 SGIP1Q9BQI5 828 aa7.22□□□□□ -1.25
PTPN12-206ENST00000435495 PRR29P0C7W0 189 aa7.22□□□□□ -1.25
PTPN12-206ENST00000435495 RYDENQ9NUL5 291 aaKnown RBP7.22□□□□□ -1.25
PTPN12-206ENST00000435495 NCKAP5LQ9HCH0 1330 aa7.22□□□□□ -1.25
PTPN12-206ENST00000435495 ARHGEF1Q92888 912 aaKnown RBP7.21□□□□□ -1.26
PTPN12-206ENST00000435495 LOC105371045A0A1W2PR82 267 aa7.2□□□□□ -1.26
PTPN12-206ENST00000435495 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
PTPN12-206ENST00000435495 CHADLQ6NUI6 762 aa7.18□□□□□ -1.26
PTPN12-206ENST00000435495 MKRN3Q13064 507 aaKnown RBP7.18□□□□□ -1.26
PTPN12-206ENST00000435495 PHF8Q9UPP1 1060 aa7.17□□□□□ -1.26
PTPN12-206ENST00000435495 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
PTPN12-206ENST00000435495 EFCAB3Q8N7B9 438 aa7.16□□□□□ -1.26
PTPN12-206ENST00000435495 LARP6Q9BRS8 491 aaKnown RBP7.16□□□□□ -1.26
PTPN12-206ENST00000435495 SPDYE1Q8NFV5 336 aaPredicted RBP7.15□□□□□ -1.26
PTPN12-206ENST00000435495 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
PTPN12-206ENST00000435495 FBXO22Q8NEZ5 403 aa7.15□□□□□ -1.27
PTPN12-206ENST00000435495 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
PTPN12-206ENST00000435495 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
PTPN12-206ENST00000435495 CABP2Q9NPB3 220 aa7.13□□□□□ -1.27
PTPN12-206ENST00000435495 PDAP1Q13442 181 aaKnown RBP7.12□□□□□ -1.27
PTPN12-206ENST00000435495 PSEN1P49768 467 aa7.12□□□□□ -1.27
PTPN12-206ENST00000435495 APBB1O00213 710 aa7.1□□□□□ -1.27
PTPN12-206ENST00000435495 RSPH6AQ9H0K4 717 aa7.1□□□□□ -1.27
PTPN12-206ENST00000435495 REM2Q8IYK8 340 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-206ENST00000435495 KRI1Q8N9T8 703 aaKnown RBP7.09□□□□□ -1.27
PTPN12-206ENST00000435495 IFNL1Q8IU54 200 aa7.09□□□□□ -1.27
PTPN12-206ENST00000435495 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-206ENST00000435495 GPIHBP1Q8IV16 184 aa7.08□□□□□ -1.28
PTPN12-206ENST00000435495 MS4A4AQ96JQ5 239 aa7.08□□□□□ -1.28
PTPN12-206ENST00000435495 PDE4DQ08499 809 aa7.08□□□□□ -1.28
PTPN12-206ENST00000435495 NECTIN2Q92692 538 aa7.08□□□□□ -1.28
PTPN12-206ENST00000435495 TRIM66O15016 1216 aa7.07□□□□□ -1.28
PTPN12-206ENST00000435495 PITPNM1O00562 1244 aa7.06□□□□□ -1.28
PTPN12-206ENST00000435495 AK7Q96M32 723 aa7.06□□□□□ -1.28
PTPN12-206ENST00000435495 PLEKHG3A1L390 1219 aa7.05□□□□□ -1.28
PTPN12-206ENST00000435495 CCDC61Q9Y6R9 512 aa7.05□□□□□ -1.28
PTPN12-206ENST00000435495 CLUAP1Q96AJ1 413 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms