RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 LRRC9Q6ZRR7 1453 aa23.78■■□□□ 1.4
HLA-DQB2-231ENST00000435145 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
HLA-DQB2-231ENST00000435145 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
HLA-DQB2-231ENST00000435145 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
HLA-DQB2-231ENST00000435145 CENPBP07199 599 aaPredicted RBP23.74■■□□□ 1.39
HLA-DQB2-231ENST00000435145 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
HLA-DQB2-231ENST00000435145 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
HLA-DQB2-231ENST00000435145 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
HLA-DQB2-231ENST00000435145 CTTNBP2Q8WZ74 1663 aa23.68■■□□□ 1.38
HLA-DQB2-231ENST00000435145 FYCO1Q9BQS8 1478 aa23.68■■□□□ 1.38
HLA-DQB2-231ENST00000435145 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
HLA-DQB2-231ENST00000435145 PHLDB1Q86UU1 1377 aa23.65■■□□□ 1.38
HLA-DQB2-231ENST00000435145 CASKIN1Q8WXD9 1431 aa23.64■■□□□ 1.38
HLA-DQB2-231ENST00000435145 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
HLA-DQB2-231ENST00000435145 MIER1Q8N108 512 aa23.61■■□□□ 1.37
HLA-DQB2-231ENST00000435145 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
HLA-DQB2-231ENST00000435145 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
HLA-DQB2-231ENST00000435145 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
HLA-DQB2-231ENST00000435145 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
HLA-DQB2-231ENST00000435145 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
HLA-DQB2-231ENST00000435145 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
HLA-DQB2-231ENST00000435145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.36
HLA-DQB2-231ENST00000435145 SAMD9Q5K651 1589 aa23.54■■□□□ 1.36
HLA-DQB2-231ENST00000435145 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
HLA-DQB2-231ENST00000435145 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
HLA-DQB2-231ENST00000435145 ITGAEP38570 1179 aa23.52■■□□□ 1.36
HLA-DQB2-231ENST00000435145 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
HLA-DQB2-231ENST00000435145 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
HLA-DQB2-231ENST00000435145 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
HLA-DQB2-231ENST00000435145 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
HLA-DQB2-231ENST00000435145 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
HLA-DQB2-231ENST00000435145 THOC2Q8NI27 1593 aaKnown RBP23.43■■□□□ 1.34
HLA-DQB2-231ENST00000435145 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
HLA-DQB2-231ENST00000435145 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
HLA-DQB2-231ENST00000435145 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
HLA-DQB2-231ENST00000435145 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.34
HLA-DQB2-231ENST00000435145 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
HLA-DQB2-231ENST00000435145 LRRIQ1Q96JM4 1722 aa23.38■■□□□ 1.33
HLA-DQB2-231ENST00000435145 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
HLA-DQB2-231ENST00000435145 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
HLA-DQB2-231ENST00000435145 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
HLA-DQB2-231ENST00000435145 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
HLA-DQB2-231ENST00000435145 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
HLA-DQB2-231ENST00000435145 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
HLA-DQB2-231ENST00000435145 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
HLA-DQB2-231ENST00000435145 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
HLA-DQB2-231ENST00000435145 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
HLA-DQB2-231ENST00000435145 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
HLA-DQB2-231ENST00000435145 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
HLA-DQB2-231ENST00000435145 HFM1A2PYH4 1435 aa23.24■■□□□ 1.31
HLA-DQB2-231ENST00000435145 CCDC18Q5T9S5 1454 aa23.23■■□□□ 1.31
HLA-DQB2-231ENST00000435145 PTPRKQ15262 1439 aa23.23■■□□□ 1.31
HLA-DQB2-231ENST00000435145 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
HLA-DQB2-231ENST00000435145 IQGAP2Q13576 1575 aa23.22■■□□□ 1.31
HLA-DQB2-231ENST00000435145 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
HLA-DQB2-231ENST00000435145 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
HLA-DQB2-231ENST00000435145 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
HLA-DQB2-231ENST00000435145 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
HLA-DQB2-231ENST00000435145 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
HLA-DQB2-231ENST00000435145 NAIPQ13075 1403 aa23.15■■□□□ 1.3
HLA-DQB2-231ENST00000435145 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
HLA-DQB2-231ENST00000435145 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
HLA-DQB2-231ENST00000435145 WDR62O43379 1518 aa23.11■■□□□ 1.29
HLA-DQB2-231ENST00000435145 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
HLA-DQB2-231ENST00000435145 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
HLA-DQB2-231ENST00000435145 AKNAQ7Z591 1439 aa23.06■■□□□ 1.28
HLA-DQB2-231ENST00000435145 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
HLA-DQB2-231ENST00000435145 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
HLA-DQB2-231ENST00000435145 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
HLA-DQB2-231ENST00000435145 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.28
HLA-DQB2-231ENST00000435145 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
HLA-DQB2-231ENST00000435145 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
HLA-DQB2-231ENST00000435145 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
HLA-DQB2-231ENST00000435145 TONSLQ96HA7 1378 aa22.97■■□□□ 1.27
HLA-DQB2-231ENST00000435145 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
HLA-DQB2-231ENST00000435145 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
HLA-DQB2-231ENST00000435145 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
HLA-DQB2-231ENST00000435145 DENND4BO75064 1496 aaPredicted RBP22.92■■□□□ 1.26
HLA-DQB2-231ENST00000435145 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
HLA-DQB2-231ENST00000435145 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
HLA-DQB2-231ENST00000435145 KDM6BO15054 1643 aa22.87■■□□□ 1.25
HLA-DQB2-231ENST00000435145 RAPGEF6Q8TEU7 1601 aa22.87■■□□□ 1.25
HLA-DQB2-231ENST00000435145 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
HLA-DQB2-231ENST00000435145 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
HLA-DQB2-231ENST00000435145 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
HLA-DQB2-231ENST00000435145 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
HLA-DQB2-231ENST00000435145 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
HLA-DQB2-231ENST00000435145 CHIC2Q9UKJ5 165 aa22.82■■□□□ 1.24
HLA-DQB2-231ENST00000435145 DAPK1P53355 1430 aa22.81■■□□□ 1.24
HLA-DQB2-231ENST00000435145 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
HLA-DQB2-231ENST00000435145 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
HLA-DQB2-231ENST00000435145 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
HLA-DQB2-231ENST00000435145 ABCC5O15440 1437 aa22.78■■□□□ 1.24
HLA-DQB2-231ENST00000435145 HIRIP3Q9BW71 556 aaPredicted RBP22.78■■□□□ 1.24
HLA-DQB2-231ENST00000435145 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
HLA-DQB2-231ENST00000435145 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
HLA-DQB2-231ENST00000435145 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
HLA-DQB2-231ENST00000435145 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
HLA-DQB2-231ENST00000435145 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
HLA-DQB2-231ENST00000435145 CDK11AQ9UQ88 783 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms