RNA–Protein interactions for RNA: ENST00000434559.1

LINC01878-201, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-201ENST00000434559 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
LINC01878-201ENST00000434559 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
LINC01878-201ENST00000434559 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
LINC01878-201ENST00000434559 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
LINC01878-201ENST00000434559 BCANQ96GW7 911 aa12.44□□□□□ -0.42
LINC01878-201ENST00000434559 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
LINC01878-201ENST00000434559 HS6ST3Q8IZP7 471 aa12.43□□□□□ -0.42
LINC01878-201ENST00000434559 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
LINC01878-201ENST00000434559 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
LINC01878-201ENST00000434559 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
LINC01878-201ENST00000434559 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
LINC01878-201ENST00000434559 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
LINC01878-201ENST00000434559 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
LINC01878-201ENST00000434559 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
LINC01878-201ENST00000434559 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
LINC01878-201ENST00000434559 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
LINC01878-201ENST00000434559 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
LINC01878-201ENST00000434559 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
LINC01878-201ENST00000434559 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
LINC01878-201ENST00000434559 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01878-201ENST00000434559 STK25O00506 426 aa12.23□□□□□ -0.45
LINC01878-201ENST00000434559 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
LINC01878-201ENST00000434559 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
LINC01878-201ENST00000434559 PYGBP11216 843 aa12.19□□□□□ -0.46
LINC01878-201ENST00000434559 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
LINC01878-201ENST00000434559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
LINC01878-201ENST00000434559 EVX2Q03828 476 aa12.15□□□□□ -0.46
LINC01878-201ENST00000434559 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
LINC01878-201ENST00000434559 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
LINC01878-201ENST00000434559 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
LINC01878-201ENST00000434559 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
LINC01878-201ENST00000434559 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
LINC01878-201ENST00000434559 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
LINC01878-201ENST00000434559 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
LINC01878-201ENST00000434559 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
LINC01878-201ENST00000434559 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
LINC01878-201ENST00000434559 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
LINC01878-201ENST00000434559 NBR1Q14596 966 aa12.02□□□□□ -0.49
LINC01878-201ENST00000434559 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.49
LINC01878-201ENST00000434559 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
LINC01878-201ENST00000434559 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
LINC01878-201ENST00000434559 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
LINC01878-201ENST00000434559 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
LINC01878-201ENST00000434559 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
LINC01878-201ENST00000434559 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
LINC01878-201ENST00000434559 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
LINC01878-201ENST00000434559 PSEN1P49768 467 aa11.9□□□□□ -0.5
LINC01878-201ENST00000434559 LHX8Q68G74 356 aa11.9□□□□□ -0.5
LINC01878-201ENST00000434559 GABBR2O75899 941 aa11.89□□□□□ -0.51
LINC01878-201ENST00000434559 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
LINC01878-201ENST00000434559 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
LINC01878-201ENST00000434559 MAP3K13O43283 966 aa11.82□□□□□ -0.52
LINC01878-201ENST00000434559 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
LINC01878-201ENST00000434559 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
LINC01878-201ENST00000434559 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
LINC01878-201ENST00000434559 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
LINC01878-201ENST00000434559 SOX12O15370 315 aa11.75□□□□□ -0.53
LINC01878-201ENST00000434559 NLRP6P59044 892 aa11.75□□□□□ -0.53
LINC01878-201ENST00000434559 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
LINC01878-201ENST00000434559 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
LINC01878-201ENST00000434559 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
LINC01878-201ENST00000434559 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
LINC01878-201ENST00000434559 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
LINC01878-201ENST00000434559 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
LINC01878-201ENST00000434559 PPP1R37O75864 691 aa11.69□□□□□ -0.54
LINC01878-201ENST00000434559 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
LINC01878-201ENST00000434559 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
LINC01878-201ENST00000434559 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
LINC01878-201ENST00000434559 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
LINC01878-201ENST00000434559 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
LINC01878-201ENST00000434559 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
LINC01878-201ENST00000434559 E2F4Q16254 413 aa11.58□□□□□ -0.56
LINC01878-201ENST00000434559 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
LINC01878-201ENST00000434559 DCBLD2Q96PD2 775 aa11.58□□□□□ -0.56
LINC01878-201ENST00000434559 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
LINC01878-201ENST00000434559 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
LINC01878-201ENST00000434559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC01878-201ENST00000434559 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
LINC01878-201ENST00000434559 TULP1O00294 542 aaPredicted RBP11.53□□□□□ -0.56
LINC01878-201ENST00000434559 PDE4AP27815 886 aa11.53□□□□□ -0.56
LINC01878-201ENST00000434559 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
LINC01878-201ENST00000434559 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
LINC01878-201ENST00000434559 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
LINC01878-201ENST00000434559 CLCN6P51797 869 aa11.51□□□□□ -0.57
LINC01878-201ENST00000434559 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
LINC01878-201ENST00000434559 TIE1P35590 1138 aa11.5□□□□□ -0.57
LINC01878-201ENST00000434559 MFSD10Q14728 455 aa11.49□□□□□ -0.57
LINC01878-201ENST00000434559 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
LINC01878-201ENST00000434559 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
LINC01878-201ENST00000434559 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
LINC01878-201ENST00000434559 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
LINC01878-201ENST00000434559 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
LINC01878-201ENST00000434559 SEMA3EO15041 775 aa11.43□□□□□ -0.58
LINC01878-201ENST00000434559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC01878-201ENST00000434559 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
LINC01878-201ENST00000434559 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
LINC01878-201ENST00000434559 CAMK2BQ13554 666 aa11.4□□□□□ -0.58
LINC01878-201ENST00000434559 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
LINC01878-201ENST00000434559 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
LINC01878-201ENST00000434559 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 282.4 ms