RNA–Protein interactions for RNA: ENST00000428799.1

XPNPEP3-203, Transcript of X-prolyl aminopeptidase 3, humanhuman

TSL 2

Gene XPNPEP3, Length 2,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3-203ENST00000428799 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
XPNPEP3-203ENST00000428799 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
XPNPEP3-203ENST00000428799 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
XPNPEP3-203ENST00000428799 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
XPNPEP3-203ENST00000428799 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
XPNPEP3-203ENST00000428799 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
XPNPEP3-203ENST00000428799 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
XPNPEP3-203ENST00000428799 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
XPNPEP3-203ENST00000428799 HIRIP3Q9BW71 556 aaPredicted RBP12.76□□□□□ -0.37
XPNPEP3-203ENST00000428799 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
XPNPEP3-203ENST00000428799 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
XPNPEP3-203ENST00000428799 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
XPNPEP3-203ENST00000428799 CUX1P39880 1505 aa12.73□□□□□ -0.37
XPNPEP3-203ENST00000428799 PPP1R15AO75807 674 aaPredicted RBP12.73□□□□□ -0.37
XPNPEP3-203ENST00000428799 NEFLP07196 543 aa12.73□□□□□ -0.37
XPNPEP3-203ENST00000428799 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
XPNPEP3-203ENST00000428799 DEKP35659 375 aaKnown RBP12.71□□□□□ -0.37
XPNPEP3-203ENST00000428799 MSH5O43196 834 aa12.71□□□□□ -0.38
XPNPEP3-203ENST00000428799 PKNOX2Q96KN3 472 aa12.71□□□□□ -0.38
XPNPEP3-203ENST00000428799 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
XPNPEP3-203ENST00000428799 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
XPNPEP3-203ENST00000428799 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
XPNPEP3-203ENST00000428799 PHLDB1Q86UU1 1377 aa12.67□□□□□ -0.38
XPNPEP3-203ENST00000428799 ANP32CO43423 234 aa12.67□□□□□ -0.38
XPNPEP3-203ENST00000428799 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
XPNPEP3-203ENST00000428799 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
XPNPEP3-203ENST00000428799 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
XPNPEP3-203ENST00000428799 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
XPNPEP3-203ENST00000428799 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
XPNPEP3-203ENST00000428799 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
XPNPEP3-203ENST00000428799 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
XPNPEP3-203ENST00000428799 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
XPNPEP3-203ENST00000428799 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
XPNPEP3-203ENST00000428799 IGF1RP08069 1367 aa12.6□□□□□ -0.39
XPNPEP3-203ENST00000428799 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
XPNPEP3-203ENST00000428799 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
XPNPEP3-203ENST00000428799 CFTRP13569 1480 aa12.55□□□□□ -0.4
XPNPEP3-203ENST00000428799 TONSLQ96HA7 1378 aa12.55□□□□□ -0.4
XPNPEP3-203ENST00000428799 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
XPNPEP3-203ENST00000428799 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
XPNPEP3-203ENST00000428799 PCF11O94913 1555 aaKnown RBP12.54□□□□□ -0.4
XPNPEP3-203ENST00000428799 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
XPNPEP3-203ENST00000428799 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
XPNPEP3-203ENST00000428799 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
XPNPEP3-203ENST00000428799 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
XPNPEP3-203ENST00000428799 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
XPNPEP3-203ENST00000428799 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
XPNPEP3-203ENST00000428799 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
XPNPEP3-203ENST00000428799 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
XPNPEP3-203ENST00000428799 CCDC18Q5T9S5 1454 aa12.47□□□□□ -0.41
XPNPEP3-203ENST00000428799 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.42
XPNPEP3-203ENST00000428799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.42
XPNPEP3-203ENST00000428799 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
XPNPEP3-203ENST00000428799 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
XPNPEP3-203ENST00000428799 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
XPNPEP3-203ENST00000428799 FYCO1Q9BQS8 1478 aa12.43□□□□□ -0.42
XPNPEP3-203ENST00000428799 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
XPNPEP3-203ENST00000428799 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
XPNPEP3-203ENST00000428799 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
XPNPEP3-203ENST00000428799 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
XPNPEP3-203ENST00000428799 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
XPNPEP3-203ENST00000428799 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
XPNPEP3-203ENST00000428799 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
XPNPEP3-203ENST00000428799 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
XPNPEP3-203ENST00000428799 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
XPNPEP3-203ENST00000428799 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
XPNPEP3-203ENST00000428799 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
XPNPEP3-203ENST00000428799 NAIPQ13075 1403 aa12.38□□□□□ -0.43
XPNPEP3-203ENST00000428799 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
XPNPEP3-203ENST00000428799 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
XPNPEP3-203ENST00000428799 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
XPNPEP3-203ENST00000428799 CADPSQ9ULU8 1353 aa12.36□□□□□ -0.43
XPNPEP3-203ENST00000428799 EFCAB5A4FU69 1503 aa12.36□□□□□ -0.43
XPNPEP3-203ENST00000428799 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
XPNPEP3-203ENST00000428799 RRP7BPQ9NSQ0 103 aa12.34□□□□□ -0.43
XPNPEP3-203ENST00000428799 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
XPNPEP3-203ENST00000428799 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 NBR1Q14596 966 aa12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 FMN1Q68DA7 1419 aa12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
XPNPEP3-203ENST00000428799 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
XPNPEP3-203ENST00000428799 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
XPNPEP3-203ENST00000428799 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
XPNPEP3-203ENST00000428799 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
XPNPEP3-203ENST00000428799 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
XPNPEP3-203ENST00000428799 CTTNBP2Q8WZ74 1663 aa12.31□□□□□ -0.44
XPNPEP3-203ENST00000428799 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
XPNPEP3-203ENST00000428799 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
XPNPEP3-203ENST00000428799 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
XPNPEP3-203ENST00000428799 ZMYND15Q9H091 742 aa12.29□□□□□ -0.44
XPNPEP3-203ENST00000428799 FOXD1Q16676 465 aa12.28□□□□□ -0.44
XPNPEP3-203ENST00000428799 CCDC7Q96M83 1385 aa12.28□□□□□ -0.44
XPNPEP3-203ENST00000428799 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.44
XPNPEP3-203ENST00000428799 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
XPNPEP3-203ENST00000428799 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
XPNPEP3-203ENST00000428799 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
XPNPEP3-203ENST00000428799 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
XPNPEP3-203ENST00000428799 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms