RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
PUM1-205ENST00000424085 WDR43Q15061 677 aaKnown RBP eCLIP10.54□□□□□ -0.72
PUM1-205ENST00000424085 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
PUM1-205ENST00000424085 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
PUM1-205ENST00000424085 ARXQ96QS3 562 aa10.53□□□□□ -0.72
PUM1-205ENST00000424085 NACADO15069 1562 aa10.52□□□□□ -0.72
PUM1-205ENST00000424085 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.72
PUM1-205ENST00000424085 CDK11BP21127 795 aaKnown RBP10.52□□□□□ -0.73
PUM1-205ENST00000424085 TMC1Q8TDI8 760 aa10.52□□□□□ -0.73
PUM1-205ENST00000424085 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.73
PUM1-205ENST00000424085 ANP32BQ92688 251 aaKnown RBP10.52□□□□□ -0.73
PUM1-205ENST00000424085 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
PUM1-205ENST00000424085 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.731e-10■□□□□ 9.9
PUM1-205ENST00000424085 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
PUM1-205ENST00000424085 NPHP1O15259 732 aa10.5□□□□□ -0.73
PUM1-205ENST00000424085 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
PUM1-205ENST00000424085 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
PUM1-205ENST00000424085 CEP164Q9UPV0 1460 aa10.46□□□□□ -0.73
PUM1-205ENST00000424085 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
PUM1-205ENST00000424085 FAM9BQ8IZU0 186 aa10.45□□□□□ -0.74
PUM1-205ENST00000424085 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
PUM1-205ENST00000424085 SOGA1O94964 1423 aa10.44□□□□□ -0.74
PUM1-205ENST00000424085 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
PUM1-205ENST00000424085 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
PUM1-205ENST00000424085 CFDP1Q9UEE9 299 aaPredicted RBP10.43□□□□□ -0.74
PUM1-205ENST00000424085 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
PUM1-205ENST00000424085 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
PUM1-205ENST00000424085 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
PUM1-205ENST00000424085 POGKQ9P215 609 aa10.42□□□□□ -0.74
PUM1-205ENST00000424085 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
PUM1-205ENST00000424085 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
PUM1-205ENST00000424085 RRP7BPQ9NSQ0 103 aa10.39□□□□□ -0.75
PUM1-205ENST00000424085 MLECQ14165 292 aa10.38□□□□□ -0.75
PUM1-205ENST00000424085 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
PUM1-205ENST00000424085 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
PUM1-205ENST00000424085 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.756e-9■■■■■ 29.6
PUM1-205ENST00000424085 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
PUM1-205ENST00000424085 BAZ1BQ9UIG0 1483 aaKnown RBP10.34□□□□□ -0.75
PUM1-205ENST00000424085 NUDCQ9Y266 331 aa10.34□□□□□ -0.75
PUM1-205ENST00000424085 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
PUM1-205ENST00000424085 KIF27Q86VH2 1401 aa10.33□□□□□ -0.75
PUM1-205ENST00000424085 KNSTRNQ9Y448 316 aa10.33□□□□□ -0.76
PUM1-205ENST00000424085 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
PUM1-205ENST00000424085 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
PUM1-205ENST00000424085 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
PUM1-205ENST00000424085 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
PUM1-205ENST00000424085 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
PUM1-205ENST00000424085 CCNB3Q8WWL7 1395 aa10.29□□□□□ -0.76
PUM1-205ENST00000424085 SIN3AQ96ST3 1273 aa10.29□□□□□ -0.76
PUM1-205ENST00000424085 WIZO95785 1651 aa10.29□□□□□ -0.76
PUM1-205ENST00000424085 KANK1Q14678 1352 aa10.28□□□□□ -0.76
PUM1-205ENST00000424085 ANP32EQ9BTT0 268 aa10.27□□□□□ -0.76
PUM1-205ENST00000424085 ZRSR1Q15695 479 aaKnown RBP10.27□□□□□ -0.77
PUM1-205ENST00000424085 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
PUM1-205ENST00000424085 NCLP19338 710 aaKnown RBP10.27□□□□□ -0.77
PUM1-205ENST00000424085 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
PUM1-205ENST00000424085 EIF5BO60841 1220 aaKnown RBP10.25□□□□□ -0.77
PUM1-205ENST00000424085 GGT6Q6P531 493 aa10.25□□□□□ -0.77
PUM1-205ENST00000424085 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
PUM1-205ENST00000424085 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
PUM1-205ENST00000424085 FTSJ3Q8IY81 847 aaKnown RBP10.24□□□□□ -0.77
PUM1-205ENST00000424085 TMX4Q9H1E5 349 aaPredicted RBP10.24□□□□□ -0.77
PUM1-205ENST00000424085 PNNQ9H307 717 aaKnown RBP10.24□□□□□ -0.77
PUM1-205ENST00000424085 TOP2AP11388 1531 aaKnown RBP10.24□□□□□ -0.77
PUM1-205ENST00000424085 CASC1Q6TDU7 716 aa10.23□□□□□ -0.77
PUM1-205ENST00000424085 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
PUM1-205ENST00000424085 OS9Q13438 667 aaPredicted RBP10.23□□□□□ -0.77
PUM1-205ENST00000424085 SOX12O15370 315 aa10.23□□□□□ -0.77
PUM1-205ENST00000424085 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
PUM1-205ENST00000424085 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
PUM1-205ENST00000424085 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
PUM1-205ENST00000424085 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
PUM1-205ENST00000424085 CSB-PGBD3P0DP91 1061 aa10.22□□□□□ -0.77
PUM1-205ENST00000424085 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
PUM1-205ENST00000424085 U2SURPO15042 1029 aaKnown RBP10.21□□□□□ -0.77
PUM1-205ENST00000424085 FGD1P98174 961 aa10.21□□□□□ -0.77
PUM1-205ENST00000424085 NBR1Q14596 966 aa10.19□□□□□ -0.78
PUM1-205ENST00000424085 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
PUM1-205ENST00000424085 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
PUM1-205ENST00000424085 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
PUM1-205ENST00000424085 TNNT2P45379 298 aaPredicted RBP10.19□□□□□ -0.78
PUM1-205ENST00000424085 ISY1Q9ULR0 285 aaKnown RBP10.18□□□□□ -0.78
PUM1-205ENST00000424085 CCER2I3L3R5 266 aa10.18□□□□□ -0.78
PUM1-205ENST00000424085 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
PUM1-205ENST00000424085 BECN1Q14457 450 aa10.17□□□□□ -0.78
PUM1-205ENST00000424085 CARMIL1Q5VZK9 1371 aa10.17□□□□□ -0.78
PUM1-205ENST00000424085 KCNJ4P48050 445 aa10.17□□□□□ -0.78
PUM1-205ENST00000424085 EID1Q9Y6B2 187 aa10.17□□□□□ -0.78
PUM1-205ENST00000424085 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
PUM1-205ENST00000424085 MS4A1P11836 297 aa10.16□□□□□ -0.78
PUM1-205ENST00000424085 EFCAB2Q5VUJ9 269 aa10.16□□□□□ -0.78
PUM1-205ENST00000424085 RTF1Q92541 710 aaKnown RBP10.16□□□□□ -0.78
PUM1-205ENST00000424085 CARMIL2Q6F5E8 1435 aa10.16□□□□□ -0.78
PUM1-205ENST00000424085 RAB3GAP2Q9H2M9 1393 aa10.16□□□□□ -0.78
PUM1-205ENST00000424085 SAFB2Q14151 953 aaKnown RBP eCLIP10.15□□□□□ -0.78
PUM1-205ENST00000424085 CUX2O14529 1486 aa10.15□□□□□ -0.79
PUM1-205ENST00000424085 PPP4R2Q9NY27 417 aa10.14□□□□□ -0.79
PUM1-205ENST00000424085 TMF1P82094 1093 aa10.14□□□□□ -0.79
PUM1-205ENST00000424085 CHMP4AQ9BY43 222 aa10.14□□□□□ -0.79
PUM1-205ENST00000424085 HDGFL2Q7Z4V5 671 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms