RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
PTPA-211ENST00000417504 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
PTPA-211ENST00000417504 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
PTPA-211ENST00000417504 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
PTPA-211ENST00000417504 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
PTPA-211ENST00000417504 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
PTPA-211ENST00000417504 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
PTPA-211ENST00000417504 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
PTPA-211ENST00000417504 CUX1P39880 1505 aa13.72□□□□□ -0.21
PTPA-211ENST00000417504 WDR62O43379 1518 aa13.71□□□□□ -0.21
PTPA-211ENST00000417504 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
PTPA-211ENST00000417504 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
PTPA-211ENST00000417504 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
PTPA-211ENST00000417504 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PTPA-211ENST00000417504 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
PTPA-211ENST00000417504 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
PTPA-211ENST00000417504 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
PTPA-211ENST00000417504 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
PTPA-211ENST00000417504 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
PTPA-211ENST00000417504 PROM2Q8N271 834 aa13.57□□□□□ -0.24
PTPA-211ENST00000417504 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
PTPA-211ENST00000417504 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
PTPA-211ENST00000417504 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
PTPA-211ENST00000417504 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
PTPA-211ENST00000417504 SOGA1O94964 1423 aa13.51□□□□□ -0.25
PTPA-211ENST00000417504 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
PTPA-211ENST00000417504 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
PTPA-211ENST00000417504 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
PTPA-211ENST00000417504 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
PTPA-211ENST00000417504 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
PTPA-211ENST00000417504 EEA1Q15075 1411 aa13.43□□□□□ -0.26
PTPA-211ENST00000417504 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
PTPA-211ENST00000417504 CUL7Q14999 1698 aa13.4□□□□□ -0.26
PTPA-211ENST00000417504 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
PTPA-211ENST00000417504 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
PTPA-211ENST00000417504 ERICH3Q5RHP9 1530 aa13.38□□□□□ -0.27
PTPA-211ENST00000417504 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
PTPA-211ENST00000417504 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
PTPA-211ENST00000417504 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.276e-7■■□□□ 11.9
PTPA-211ENST00000417504 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
PTPA-211ENST00000417504 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
PTPA-211ENST00000417504 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
PTPA-211ENST00000417504 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
PTPA-211ENST00000417504 KIF21BO75037 1637 aa13.32□□□□□ -0.28
PTPA-211ENST00000417504 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
PTPA-211ENST00000417504 CHD1O14646 1710 aa13.3□□□□□ -0.28
PTPA-211ENST00000417504 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
PTPA-211ENST00000417504 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
PTPA-211ENST00000417504 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
PTPA-211ENST00000417504 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
PTPA-211ENST00000417504 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
PTPA-211ENST00000417504 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
PTPA-211ENST00000417504 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
PTPA-211ENST00000417504 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
PTPA-211ENST00000417504 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
PTPA-211ENST00000417504 IGF1RP08069 1367 aa13.24□□□□□ -0.29
PTPA-211ENST00000417504 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
PTPA-211ENST00000417504 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
PTPA-211ENST00000417504 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
PTPA-211ENST00000417504 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
PTPA-211ENST00000417504 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
PTPA-211ENST00000417504 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
PTPA-211ENST00000417504 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
PTPA-211ENST00000417504 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
PTPA-211ENST00000417504 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
PTPA-211ENST00000417504 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
PTPA-211ENST00000417504 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
PTPA-211ENST00000417504 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PTPA-211ENST00000417504 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
PTPA-211ENST00000417504 IQGAP2Q13576 1575 aa13.11□□□□□ -0.31
PTPA-211ENST00000417504 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
PTPA-211ENST00000417504 NUP160Q12769 1436 aa13.08□□□□□ -0.32
PTPA-211ENST00000417504 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
PTPA-211ENST00000417504 MIER1Q8N108 512 aa13.07□□□□□ -0.32
PTPA-211ENST00000417504 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
PTPA-211ENST00000417504 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
PTPA-211ENST00000417504 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
PTPA-211ENST00000417504 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
PTPA-211ENST00000417504 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
PTPA-211ENST00000417504 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
PTPA-211ENST00000417504 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
PTPA-211ENST00000417504 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
PTPA-211ENST00000417504 CEP162Q5TB80 1403 aa13.01□□□□□ -0.33
PTPA-211ENST00000417504 SAMD9Q5K651 1589 aa13□□□□□ -0.33
PTPA-211ENST00000417504 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
PTPA-211ENST00000417504 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
PTPA-211ENST00000417504 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
PTPA-211ENST00000417504 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
PTPA-211ENST00000417504 CLIP1P30622 1438 aa12.98□□□□□ -0.33
PTPA-211ENST00000417504 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
PTPA-211ENST00000417504 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
PTPA-211ENST00000417504 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPA-211ENST00000417504 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
PTPA-211ENST00000417504 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
PTPA-211ENST00000417504 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
PTPA-211ENST00000417504 ARHGAP35Q9NRY4 1499 aa12.92□□□□□ -0.34
PTPA-211ENST00000417504 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
PTPA-211ENST00000417504 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
PTPA-211ENST00000417504 DISP1Q96F81 1524 aa12.9□□□□□ -0.34
PTPA-211ENST00000417504 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms